Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2003

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
2,284,809	+		Pf1N1B4_2002	0.50	+0.3
2,284,810	-				-1.5
2,285,053	-		Pf1N1B4_2002	0.64	-0.3
2,285,133	+		Pf1N1B4_2002	0.68	-0.7
2,285,133	+		Pf1N1B4_2002	0.68	-1.5
2,285,133	+		Pf1N1B4_2002	0.68	-0.6
2,285,133	+		Pf1N1B4_2002	0.68	+0.0
2,285,134	-		Pf1N1B4_2002	0.68	-1.6
2,285,134	-		Pf1N1B4_2002	0.68	-0.3
2,285,134	-		Pf1N1B4_2002	0.68	-0.7
2,285,134	-		Pf1N1B4_2002	0.68	+0.5
2,285,134	-		Pf1N1B4_2002	0.68	-1.1
2,285,134	-		Pf1N1B4_2002	0.68	-1.3
2,285,134	-		Pf1N1B4_2002	0.68	-0.5
2,285,134	-		Pf1N1B4_2002	0.68	-0.3
2,285,215	+		Pf1N1B4_2002	0.73	-1.0
2,285,215	+		Pf1N1B4_2002	0.73	+1.3
2,285,215	+		Pf1N1B4_2002	0.73	+0.5
2,285,215	+		Pf1N1B4_2002	0.73	+0.5
2,285,216	-		Pf1N1B4_2002	0.73	-1.0
2,285,216	-		Pf1N1B4_2002	0.73	+0.7
2,285,216	-		Pf1N1B4_2002	0.73	+0.3
2,285,216	-		Pf1N1B4_2002	0.73	-0.8
2,285,216	-		Pf1N1B4_2002	0.73	-0.2
2,285,216	-		Pf1N1B4_2002	0.73	+0.7
2,285,287	-		Pf1N1B4_2002	0.77	-0.8
2,285,384	+		Pf1N1B4_2002	0.82	-0.3
2,285,384	+		Pf1N1B4_2002	0.82	+2.3
2,285,385	-				-0.3
2,285,385	-		Pf1N1B4_2002	0.82	-0.8
2,285,385	-		Pf1N1B4_2002	0.82	+0.6
2,285,578	+				+0.3
2,285,579	-				+1.2
2,285,630	+				-2.5
2,285,713	-				-0.4
2,285,713	-				+1.9
2,285,752	+				-1.7
2,285,831	+		Pf1N1B4_2003	0.28	+0.3
2,285,834	+		Pf1N1B4_2003	0.29	-1.7
2,285,834	+		Pf1N1B4_2003	0.29	-1.0
2,285,834	+		Pf1N1B4_2003	0.29	-1.0
2,285,834	+		Pf1N1B4_2003	0.29	+1.3
2,285,835	-		Pf1N1B4_2003	0.29	+0.3
2,285,835	-		Pf1N1B4_2003	0.29	-0.8
2,285,835	-		Pf1N1B4_2003	0.29	-1.7
2,285,835	-		Pf1N1B4_2003	0.29	+1.0
2,285,835	-		Pf1N1B4_2003	0.29	-1.3
2,285,835	-		Pf1N1B4_2003	0.29	-0.8
2,285,915	+		Pf1N1B4_2003	0.49	-1.7
2,285,915	+		Pf1N1B4_2003	0.49	-0.3
2,285,916	-		Pf1N1B4_2003	0.49	+0.5
2,285,916	-		Pf1N1B4_2003	0.49	-2.1
2,286,155	+				-2.0
2,286,156	-				+0.3
2,286,169	+				+1.3
2,286,169	+				+0.5
2,286,171	+				-3.1
2,286,171	+				+1.3
2,286,171	+				-1.0
2,286,171	+				-0.5
2,286,171	+				+1.1
2,286,171	+				-0.7
2,286,172	-				+0.6
2,286,172	-				-0.5
2,286,172	-				-1.7
2,286,172	-				-1.0
2,286,172	-				+1.3
2,286,172	-				-0.1
2,286,172	-				+0.3
2,286,176	+				+0.1
2,286,176	+				-1.0
2,286,176	+				-2.1
2,286,176	+				+0.7
2,286,176	+				-1.3
2,286,177	-				+0.0
2,286,177	-				-2.2
2,286,186	+				-0.4
2,286,186	+				-1.1
2,286,186	+				+0.6
2,286,186	+				-2.1
2,286,186	+				-0.8
2,286,187	-				+0.5
2,286,187	-				+1.8
2,286,187	-				+0.5
2,286,187	-				+0.1
2,286,187	-				+1.3
2,286,187	-				+1.6
2,286,187	-				+1.8
2,286,187	-				+1.3
2,286,187	-				+0.3
2,286,187	-				-1.8
2,286,187	-				+0.1
2,286,203	+				+1.0
2,286,231	+				-1.0
2,286,231	+				-1.3
2,286,235	-				-0.6
2,286,438	-		Pf1N1B4_2004	0.20	+1.1
2,286,438	-		Pf1N1B4_2004	0.20	-1.3
2,286,456	+		Pf1N1B4_2004	0.22	+0.1
2,286,457	-		Pf1N1B4_2004	0.22	-2.3
2,286,457	-		Pf1N1B4_2004	0.22	+1.3
2,286,749	-		Pf1N1B4_2004	0.56	-1.0
2,287,121	-				+0.1