Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1907

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
2,180,564	+				+2.9
2,180,564	+				-0.3
2,180,565	-				+0.3
2,180,649	-				-0.5
2,180,649	-				-1.0
2,180,726	+				-1.3
2,180,727	-				+1.3
2,180,831	+		Pf1N1B4_1906	0.21	-0.3
2,180,831	+		Pf1N1B4_1906	0.21	-2.6
2,180,832	-		Pf1N1B4_1906	0.21	-1.5
2,180,832	-		Pf1N1B4_1906	0.21	-1.0
2,180,832	-		Pf1N1B4_1906	0.21	+2.7
2,180,844	-		Pf1N1B4_1906	0.23	-2.1
2,180,844	-		Pf1N1B4_1906	0.23	-1.5
2,180,890	+		Pf1N1B4_1906	0.28	-0.7
2,180,890	+		Pf1N1B4_1906	0.28	-1.9
2,180,891	-		Pf1N1B4_1906	0.29	-3.3
2,181,121	-		Pf1N1B4_1906	0.57	-1.9
2,181,380	+		Pf1N1B4_1906	0.88	+1.3
2,181,381	-		Pf1N1B4_1906	0.88	-1.0
2,181,381	-		Pf1N1B4_1906	0.88	-1.3
2,181,381	-		Pf1N1B4_1906	0.88	-0.7
2,181,460	+				-0.3
2,181,461	-				+0.3
2,181,468	-				-2.8
2,181,479	+				-0.7
2,181,479	+				-1.0
2,181,479	+				-1.3
2,181,479	+				+1.3
2,181,480	-				-0.3
2,181,480	-				+1.9
2,181,480	-				+1.1
2,181,480	-				-0.5
2,181,480	-				+1.3
2,181,480	-				+1.3
2,181,480	-				-2.5
2,181,480	-				+1.3
2,181,480	-				-1.3
2,181,480	-				+0.2
2,181,480	-				+1.1
2,181,480	-				-0.0
2,181,495	-				-1.3
2,181,495	-				-0.3
2,181,495	-				+0.3
2,181,495	-				-1.3
2,182,499	+				-0.4
2,182,499	+				-1.5
2,182,499	+				-1.6
2,182,500	-				-0.3
2,182,513	-				+0.3
2,182,538	-				-0.8
2,182,538	-				-1.1
2,182,596	+				-0.4
2,182,597	-				-0.4
2,182,612	-				+1.3
2,182,619	+				+0.3
2,182,619	+				+0.3
2,182,619	+				+1.0
2,182,620	-				-0.9
2,182,620	-				+0.5
2,182,690	+				-0.3
2,182,691	-				+1.2
2,182,707	+				-1.1
2,182,782	+		Pf1N1B4_1908	0.14	+0.7
2,182,782	+		Pf1N1B4_1908	0.14	+0.5
2,182,782	+		Pf1N1B4_1908	0.14	-0.0
2,182,782	+		Pf1N1B4_1908	0.14	-1.9
2,182,782	+		Pf1N1B4_1908	0.14	-0.7
2,182,782	+				-0.7
2,182,782	+		Pf1N1B4_1908	0.14	-2.6
2,182,782	+		Pf1N1B4_1908	0.14	-2.4
2,182,782	+		Pf1N1B4_1908	0.14	-1.3
2,182,782	+		Pf1N1B4_1908	0.14	+0.3
2,182,782	+		Pf1N1B4_1908	0.14	+0.1
2,182,782	+		Pf1N1B4_1908	0.14	+0.8
2,182,782	+		Pf1N1B4_1908	0.14	-1.1
2,182,782	+		Pf1N1B4_1908	0.14	+1.3
2,182,782	+		Pf1N1B4_1908	0.14	-0.4
2,182,782	+		Pf1N1B4_1908	0.14	-1.3
2,182,783	-		Pf1N1B4_1908	0.14	+0.3
2,182,783	-		Pf1N1B4_1908	0.14	-0.4
2,182,783	-		Pf1N1B4_1908	0.14	-0.6
2,182,783	-		Pf1N1B4_1908	0.14	+0.1
2,182,783	-		Pf1N1B4_1908	0.14	+0.8
2,182,783	-		Pf1N1B4_1908	0.14	-1.5
2,182,783	-		Pf1N1B4_1908	0.14	-0.7
2,182,786	-		Pf1N1B4_1908	0.14	-0.2
2,182,800	+		Pf1N1B4_1908	0.16	+0.6
2,182,801	-		Pf1N1B4_1908	0.16	+0.8
2,182,929	+		Pf1N1B4_1908	0.29	-0.5
2,182,929	+		Pf1N1B4_1908	0.29	+1.0
2,182,929	+		Pf1N1B4_1908	0.29	-3.0
2,182,929	+		Pf1N1B4_1908	0.29	-0.8
2,182,930	-		Pf1N1B4_1908	0.29	-1.9
2,182,931	+		Pf1N1B4_1908	0.29	+0.9
2,182,931	+		Pf1N1B4_1908	0.29	-0.7
2,182,932	-		Pf1N1B4_1908	0.29	+0.7
2,182,932	-		Pf1N1B4_1908	0.29	-1.3
2,182,945	+		Pf1N1B4_1908	0.30	+0.2
2,182,945	+		Pf1N1B4_1908	0.30	+0.9
2,182,945	+		Pf1N1B4_1908	0.30	+2.3
2,182,945	+		Pf1N1B4_1908	0.30	-1.0
2,182,946	-		Pf1N1B4_1908	0.31	+1.8
2,182,946	-		Pf1N1B4_1908	0.31	-0.3
2,182,966	+		Pf1N1B4_1908	0.33	-0.5
2,182,966	+		Pf1N1B4_1908	0.33	-0.3
2,182,966	+		Pf1N1B4_1908	0.33	-0.2
2,182,966	+		Pf1N1B4_1908	0.33	+0.3
2,183,052	+		Pf1N1B4_1908	0.41	-3.2
2,183,052	+		Pf1N1B4_1908	0.41	+0.3
2,183,052	+		Pf1N1B4_1908	0.41	-0.7
2,183,052	+		Pf1N1B4_1908	0.41	-0.7
2,183,052	+		Pf1N1B4_1908	0.41	-0.3
2,183,052	+		Pf1N1B4_1908	0.41	+1.6
2,183,052	+		Pf1N1B4_1908	0.41	+0.7
2,183,052	+		Pf1N1B4_1908	0.41	+0.5
2,183,052	+		Pf1N1B4_1908	0.41	-0.4
2,183,052	+		Pf1N1B4_1908	0.41	+0.9
2,183,053	-		Pf1N1B4_1908	0.42	+0.1
2,183,053	-		Pf1N1B4_1908	0.42	+0.9
2,183,053	-		Pf1N1B4_1908	0.42	+1.3
2,183,053	-		Pf1N1B4_1908	0.42	+1.3
2,183,053	-		Pf1N1B4_1908	0.42	-2.4
2,183,220	+				+1.3
2,183,220	+		Pf1N1B4_1908	0.59	+0.1
2,183,286	+		Pf1N1B4_1908	0.65	+0.2
2,183,286	+		Pf1N1B4_1908	0.65	-2.4
2,183,286	+		Pf1N1B4_1908	0.65	+1.3
2,183,286	+		Pf1N1B4_1908	0.65	-1.0
2,183,286	+		Pf1N1B4_1908	0.65	-0.5
2,183,287	-		Pf1N1B4_1908	0.65	-0.0
2,183,287	-		Pf1N1B4_1908	0.65	+0.5
2,183,287	-		Pf1N1B4_1908	0.65	-0.0
2,183,287	-		Pf1N1B4_1908	0.65	-1.7
2,183,380	+		Pf1N1B4_1908	0.75	+0.9
2,183,381	-		Pf1N1B4_1908	0.75	-0.7
2,183,424	+		Pf1N1B4_1908	0.79	-0.5
2,183,424	+		Pf1N1B4_1908	0.79	-2.4
2,183,424	+		Pf1N1B4_1908	0.79	-0.3
2,183,424	+		Pf1N1B4_1908	0.79	+0.6
2,183,424	+				+3.9
2,183,425	-		Pf1N1B4_1908	0.80	-1.3
2,183,451	+		Pf1N1B4_1908	0.82	+1.8
2,183,451	+		Pf1N1B4_1908	0.82	+0.0