Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1669

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
1,912,298	+				-0.6
1,912,298	+				+0.2
1,912,298	+				-0.8
1,912,298	+				-1.2
1,912,298	+				+0.2
1,912,298	+				+0.2
1,912,298	+				+0.6
1,912,298	+				-0.0
1,912,298	+				+0.8
1,912,298	+				+1.2
1,912,298	+				+0.4
1,912,298	+				+0.5
1,912,298	+				+0.7
1,912,299	-				+1.2
1,912,299	-				-1.4
1,912,299	-				-0.6
1,912,422	-				+1.5
1,912,422	-				+0.2
1,912,422	-				-2.1
1,912,731	-		Pf1N1B4_1668	0.36	+1.2
1,912,837	+		Pf1N1B4_1668	0.48	+0.3
1,912,838	-		Pf1N1B4_1668	0.49	+2.8
1,912,875	+		Pf1N1B4_1668	0.53	+0.5
1,912,875	+		Pf1N1B4_1668	0.53	+1.0
1,912,876	-		Pf1N1B4_1668	0.53	+0.1
1,912,876	-		Pf1N1B4_1668	0.53	+1.2
1,912,972	+		Pf1N1B4_1668	0.65	+0.1
1,912,972	+		Pf1N1B4_1668	0.65	+0.1
1,912,972	+		Pf1N1B4_1668	0.65	-1.4
1,912,972	+		Pf1N1B4_1668	0.65	-0.4
1,912,972	+		Pf1N1B4_1668	0.65	+2.4
1,912,973	-		Pf1N1B4_1668	0.65	-1.6
1,912,973	-		Pf1N1B4_1668	0.65	+1.7
1,912,973	-		Pf1N1B4_1668	0.65	+0.2
1,912,973	-		Pf1N1B4_1668	0.65	+1.2
1,912,973	-		Pf1N1B4_1668	0.65	+0.5
1,913,293	+				-0.4
1,913,293	+				+2.0
1,913,293	+				+1.9
1,913,293	+				-0.7
1,913,293	+				+0.6
1,913,293	+				+1.3
1,913,294	-				+0.1
1,913,309	+				+0.5
1,913,309	+				+0.6
1,913,309	+				+1.6
1,913,309	+				+1.2
1,913,309	+				-0.2
1,913,310	-				-1.4
1,913,432	+		Pf1N1B4_1669	0.30	-1.1
1,913,432	+		Pf1N1B4_1669	0.30	+1.9
1,913,433	-		Pf1N1B4_1669	0.30	+0.4
1,913,474	+		Pf1N1B4_1669	0.37	-0.6
1,913,474	+		Pf1N1B4_1669	0.37	+0.9
1,913,475	-		Pf1N1B4_1669	0.37	-0.8
1,913,475	-		Pf1N1B4_1669	0.37	+0.4
1,913,475	-		Pf1N1B4_1669	0.37	+0.1
1,913,612	+		Pf1N1B4_1669	0.62	+2.5
1,913,612	+		Pf1N1B4_1669	0.62	+1.0
1,913,612	+		Pf1N1B4_1669	0.62	+1.3
1,913,612	+		Pf1N1B4_1669	0.62	+1.8
1,913,612	+		Pf1N1B4_1669	0.62	+1.6
1,913,612	+		Pf1N1B4_1669	0.62	+1.7
1,913,612	+		Pf1N1B4_1669	0.62	+0.8
1,913,613	-		Pf1N1B4_1669	0.62	+0.4
1,913,613	-		Pf1N1B4_1669	0.62	-0.8
1,913,633	+		Pf1N1B4_1669	0.65	+0.7
1,913,633	+				+1.2
1,913,723	+		Pf1N1B4_1669	0.81	+1.4
1,913,723	+		Pf1N1B4_1669	0.81	+1.0
1,913,723	+		Pf1N1B4_1669	0.81	+1.6
1,913,723	+		Pf1N1B4_1669	0.81	+1.1
1,913,723	+		Pf1N1B4_1669	0.81	+0.8
1,913,723	+		Pf1N1B4_1669	0.81	+1.7
1,913,723	+		Pf1N1B4_1669	0.81	-0.2
1,913,723	+		Pf1N1B4_1669	0.81	+1.3
1,913,723	+		Pf1N1B4_1669	0.81	-0.9
1,913,724	-		Pf1N1B4_1669	0.81	-0.5
1,913,724	-		Pf1N1B4_1669	0.81	+0.1
1,913,724	-		Pf1N1B4_1669	0.81	-0.6
1,913,724	-		Pf1N1B4_1669	0.81	-2.4
1,913,727	+		Pf1N1B4_1669	0.82	-1.8
1,913,727	+		Pf1N1B4_1669	0.82	+1.0
1,913,727	+		Pf1N1B4_1669	0.82	+0.2
1,913,727	+		Pf1N1B4_1669	0.82	+0.8
1,913,727	+		Pf1N1B4_1669	0.82	+1.4
1,913,728	-		Pf1N1B4_1669	0.82	-1.3
1,913,728	-		Pf1N1B4_1669	0.82	-0.2
1,913,728	-		Pf1N1B4_1669	0.82	-2.1
1,913,809	+				+2.1
1,913,809	+				+1.6
1,913,855	+				-3.1
1,913,856	-				-1.4
1,913,856	-				+1.5
1,913,858	+				+0.8
1,913,858	+				+0.9
1,913,858	+				-1.1
1,913,858	+				-1.4
1,913,858	+				+0.8
1,913,859	-				-1.4
1,913,859	-				+0.5
1,913,859	-				-0.6
1,913,859	-				+1.0
1,913,859	-				+0.9
1,913,859	-				+0.1
1,913,859	-				+1.6
1,913,900	+				-1.1
1,913,917	+				-1.6
1,913,917	+				-1.6
1,913,917	+				-0.6
1,913,917	+				+1.3
1,913,917	+				+1.2
1,913,917	+				+0.3
1,913,917	+				+0.6
1,913,917	+				+1.2
1,913,918	-				+0.2
1,913,918	-				+0.9
1,913,918	-				+1.2
1,913,918	-				-0.8
1,913,918	-				-1.4
1,913,918	-				+0.2
1,913,990	+		Pf1N1B4_1670	0.11	+2.2
1,913,991	-		Pf1N1B4_1670	0.11	+0.2
1,913,991	-		Pf1N1B4_1670	0.11	-0.9
1,914,075	+		Pf1N1B4_1670	0.24	+0.4
1,914,076	-		Pf1N1B4_1670	0.24	+0.2
1,914,117	-		Pf1N1B4_1670	0.30	+2.1
1,914,117	-		Pf1N1B4_1670	0.30	-1.2
1,914,117	-		Pf1N1B4_1670	0.30	+0.9
1,914,117	-		Pf1N1B4_1670	0.30	+0.4
1,914,252	+		Pf1N1B4_1670	0.50	+0.6
1,914,252	+		Pf1N1B4_1670	0.50	-1.3
1,914,253	-		Pf1N1B4_1670	0.51	+1.2
1,914,436	+		Pf1N1B4_1670	0.78	+1.2
1,914,436	+		Pf1N1B4_1670	0.78	-0.8
1,914,436	+		Pf1N1B4_1670	0.78	+0.9
1,914,436	+		Pf1N1B4_1670	0.78	-0.4
1,914,437	-		Pf1N1B4_1670	0.78	+0.0
1,914,437	-		Pf1N1B4_1670	0.78	+0.5
1,914,579	-				+0.4
1,914,579	-				-0.4
1,914,579	-				+1.2
1,914,641	+				-2.1
1,914,641	+				+0.7
1,914,710	-				+0.2
1,914,764	+		Pf1N1B4_1671	0.13	-0.5
1,914,764	+		Pf1N1B4_1671	0.13	+0.2
1,914,765	-		Pf1N1B4_1671	0.13	+2.1
1,914,765	-		Pf1N1B4_1671	0.13	-1.4
1,914,765	-		Pf1N1B4_1671	0.13	-0.6
1,914,793	+		Pf1N1B4_1671	0.19	-0.1
1,914,794	-		Pf1N1B4_1671	0.20	-0.5
1,914,794	-		Pf1N1B4_1671	0.20	-0.9