Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1641

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
1,883,729	+				-0.1
1,883,730	-				-0.0
1,883,734	+				-1.5
1,883,734	+				-0.8
1,883,734	+				-0.1
1,883,734	+				+0.6
1,883,734	+				-1.2
1,883,734	+				+0.8
1,883,734	+				-0.0
1,883,734	+				-0.8
1,883,734	+				+1.0
1,883,734	+				-0.0
1,883,734	+				-0.7
1,883,734	+				+1.1
1,883,735	-				+0.1
1,883,735	-				-1.1
1,883,735	-				+1.5
1,883,735	-				-0.3
1,883,735	-				-0.0
1,883,735	-				-0.2
1,883,767	-				-1.0
1,883,785	+				-0.1
1,883,785	+				-1.3
1,883,785	+				+0.1
1,883,786	-				-1.3
1,883,786	-				+1.8
1,884,094	+		Pf1N1B4_1640	0.38	+0.3
1,884,095	-		Pf1N1B4_1640	0.38	+2.1
1,884,108	-		Pf1N1B4_1640	0.40	-0.8
1,884,176	+		Pf1N1B4_1640	0.49	-2.3
1,884,176	+		Pf1N1B4_1640	0.49	+1.2
1,884,176	+				-0.8
1,884,176	+		Pf1N1B4_1640	0.49	+0.2
1,884,176	+		Pf1N1B4_1640	0.49	-0.1
1,884,374	-		Pf1N1B4_1640	0.74	-1.1
1,884,374	-		Pf1N1B4_1640	0.74	-0.6
1,884,374	-				-0.3
1,884,374	-		Pf1N1B4_1640	0.74	+1.4
1,884,374	-		Pf1N1B4_1640	0.74	-1.7
1,884,377	+		Pf1N1B4_1640	0.75	+2.2
1,884,377	+		Pf1N1B4_1640	0.75	-1.1
1,884,377	+		Pf1N1B4_1640	0.75	-1.1
1,884,377	+		Pf1N1B4_1640	0.75	+0.9
1,884,377	+				+1.2
1,884,377	+		Pf1N1B4_1640	0.75	+1.6
1,884,377	+		Pf1N1B4_1640	0.75	-2.5
1,884,377	+		Pf1N1B4_1640	0.75	-0.1
1,884,377	+		Pf1N1B4_1640	0.75	+0.9
1,884,377	+		Pf1N1B4_1640	0.75	-0.1
1,884,377	+		Pf1N1B4_1640	0.75	+0.5
1,884,377	+		Pf1N1B4_1640	0.75	-2.0
1,884,377	+				+0.7
1,884,377	+		Pf1N1B4_1640	0.75	+0.2
1,884,377	+		Pf1N1B4_1640	0.75	+1.1
1,884,378	-		Pf1N1B4_1640	0.75	-2.6
1,884,378	-		Pf1N1B4_1640	0.75	+0.4
1,884,378	-		Pf1N1B4_1640	0.75	-1.3
1,884,378	-		Pf1N1B4_1640	0.75	-1.5
1,884,378	-		Pf1N1B4_1640	0.75	+0.6
1,884,378	-		Pf1N1B4_1640	0.75	-1.3
1,884,378	-		Pf1N1B4_1640	0.75	-0.5
1,884,378	-		Pf1N1B4_1640	0.75	-1.8
1,884,378	-		Pf1N1B4_1640	0.75	-0.3
1,884,378	-		Pf1N1B4_1640	0.75	-2.3
1,884,378	-		Pf1N1B4_1640	0.75	-0.8
1,884,378	-		Pf1N1B4_1640	0.75	-0.6
1,884,378	-		Pf1N1B4_1640	0.75	-0.8
1,884,378	-		Pf1N1B4_1640	0.75	+0.4
1,884,378	-		Pf1N1B4_1640	0.75	-1.8
1,884,378	-		Pf1N1B4_1640	0.75	+0.0
1,884,378	-		Pf1N1B4_1640	0.75	+1.8
1,884,378	-		Pf1N1B4_1640	0.75	+0.5
1,884,378	-		Pf1N1B4_1640	0.75	-1.3
1,884,378	-		Pf1N1B4_1640	0.75	-2.1
1,884,378	-		Pf1N1B4_1640	0.75	-2.6
1,884,378	-		Pf1N1B4_1640	0.75	+0.4
1,884,378	-		Pf1N1B4_1640	0.75	-0.3
1,884,378	-		Pf1N1B4_1640	0.75	-2.5
1,884,595	+				-0.8
1,884,596	-				-0.3
1,884,596	-				-2.6
1,884,789	+		Pf1N1B4_1641	0.27	-1.2
1,884,789	+		Pf1N1B4_1641	0.27	-1.3
1,884,789	+		Pf1N1B4_1641	0.27	-3.6
1,884,790	-		Pf1N1B4_1641	0.27	-0.3
1,884,790	-		Pf1N1B4_1641	0.27	-2.7
1,884,904	+		Pf1N1B4_1641	0.43	-1.1
1,884,904	+		Pf1N1B4_1641	0.43	-2.5
1,884,904	+		Pf1N1B4_1641	0.43	+0.0
1,884,905	-		Pf1N1B4_1641	0.43	-1.4
1,884,905	-		Pf1N1B4_1641	0.43	-2.4
1,884,907	+		Pf1N1B4_1641	0.43	-2.9
1,884,908	-		Pf1N1B4_1641	0.43	-2.5
1,884,908	-		Pf1N1B4_1641	0.43	-1.6
1,884,908	-		Pf1N1B4_1641	0.43	-2.1
1,884,908	-		Pf1N1B4_1641	0.43	-3.2
1,885,057	+		Pf1N1B4_1641	0.63	-2.0
1,885,126	+		Pf1N1B4_1641	0.72	-3.2
1,885,126	+		Pf1N1B4_1641	0.72	+0.1
1,885,126	+		Pf1N1B4_1641	0.72	-1.0
1,885,126	+		Pf1N1B4_1641	0.72	+1.0
1,885,126	+		Pf1N1B4_1641	0.72	-1.2
1,885,126	+		Pf1N1B4_1641	0.72	-1.8
1,885,126	+		Pf1N1B4_1641	0.72	-0.5
1,885,126	+		Pf1N1B4_1641	0.72	-3.5
1,885,126	+		Pf1N1B4_1641	0.72	-0.3
1,885,126	+		Pf1N1B4_1641	0.72	-3.8
1,885,126	+		Pf1N1B4_1641	0.72	-2.0
1,885,126	+		Pf1N1B4_1641	0.72	-0.9
1,885,126	+		Pf1N1B4_1641	0.72	-1.8
1,885,127	-		Pf1N1B4_1641	0.72	-2.3
1,885,127	-		Pf1N1B4_1641	0.72	-2.2
1,885,127	-		Pf1N1B4_1641	0.72	-1.3
1,885,127	-		Pf1N1B4_1641	0.72	-1.7
1,885,127	-		Pf1N1B4_1641	0.72	+0.4
1,885,127	-		Pf1N1B4_1641	0.72	-1.9
1,885,127	-		Pf1N1B4_1641	0.72	+0.2
1,885,127	-		Pf1N1B4_1641	0.72	-3.0
1,885,127	-		Pf1N1B4_1641	0.72	+0.4
1,885,127	-		Pf1N1B4_1641	0.72	-2.5
1,885,135	+		Pf1N1B4_1641	0.73	-1.3
1,885,135	+		Pf1N1B4_1641	0.73	-2.2
1,885,135	+		Pf1N1B4_1641	0.73	-2.7
1,885,135	+		Pf1N1B4_1641	0.73	-1.7
1,885,135	+		Pf1N1B4_1641	0.73	-2.9
1,885,135	+		Pf1N1B4_1641	0.73	-0.6
1,885,135	+		Pf1N1B4_1641	0.73	-1.1
1,885,135	+		Pf1N1B4_1641	0.73	-0.6
1,885,136	-		Pf1N1B4_1641	0.74	-0.3
1,885,136	-		Pf1N1B4_1641	0.74	-1.7
1,885,136	-		Pf1N1B4_1641	0.74	-1.1
1,885,136	-		Pf1N1B4_1641	0.74	-1.8
1,885,168	+		Pf1N1B4_1641	0.78	-0.8
1,885,168	+		Pf1N1B4_1641	0.78	-1.2
1,885,168	+		Pf1N1B4_1641	0.78	-0.8
1,885,169	-		Pf1N1B4_1641	0.78	-0.8
1,885,288	+				+0.1
1,885,288	+				-1.4
1,885,288	+				-1.9
1,885,289	-				+0.8
1,885,289	-				-0.9
1,885,289	-				-2.9
1,885,309	+				-0.5
1,885,309	+				+0.1
1,885,309	+				-0.5
1,885,309	+				-0.8
1,885,309	+				-1.8
1,885,309	+				+0.9
1,885,309	+				+0.2
1,885,309	+				-0.9
1,885,310	-				-2.8
1,885,310	-				-2.7
1,885,310	-				+0.2
1,885,310	-				-1.1
1,885,327	+				-1.6
1,885,327	+				+0.0
1,885,327	+				+0.0
1,885,327	+				-0.9
1,885,327	+				-1.9
1,885,327	+				-1.6
1,885,327	+				+0.9
1,885,327	+				-1.1
1,885,327	+				+0.2
1,885,328	-				+0.6
1,885,328	-				-1.1
1,885,328	-				+1.2
1,885,328	-				+0.2
1,885,543	+		Pf1N1B4_1642	0.19	-0.8
1,885,573	+		Pf1N1B4_1642	0.23	-0.3
1,885,574	-		Pf1N1B4_1642	0.23	-1.3
1,885,624	+		Pf1N1B4_1642	0.31	-1.3
1,885,999	+		Pf1N1B4_1642	0.84	+0.2
1,885,999	+		Pf1N1B4_1642	0.84	-1.1
1,885,999	+		Pf1N1B4_1642	0.84	+1.9
1,885,999	+		Pf1N1B4_1642	0.84	-1.1
1,885,999	+		Pf1N1B4_1642	0.84	+1.3
1,885,999	+		Pf1N1B4_1642	0.84	-0.8
1,885,999	+		Pf1N1B4_1642	0.84	-0.3
1,885,999	+		Pf1N1B4_1642	0.84	-0.6
1,886,000	-		Pf1N1B4_1642	0.85	-0.8
1,886,000	-		Pf1N1B4_1642	0.85	+0.4
1,886,000	-		Pf1N1B4_1642	0.85	+1.2
1,886,000	-		Pf1N1B4_1642	0.85	-1.3
1,886,000	-		Pf1N1B4_1642	0.85	-1.8
1,886,001	+		Pf1N1B4_1642	0.85	-0.5
1,886,001	+		Pf1N1B4_1642	0.85	-1.2
1,886,002	-		Pf1N1B4_1642	0.85	-0.7
1,886,002	-		Pf1N1B4_1642	0.85	-1.6
1,886,003	-		Pf1N1B4_1642	0.85	-1.6
1,886,020	+		Pf1N1B4_1642	0.88	+1.2
1,886,021	-		Pf1N1B4_1642	0.88	-0.9
1,886,021	-		Pf1N1B4_1642	0.88	-0.0
1,886,021	-		Pf1N1B4_1642	0.88	+0.9
1,886,021	-		Pf1N1B4_1642	0.88	+0.7
1,886,021	-		Pf1N1B4_1642	0.88	+0.5
1,886,021	-		Pf1N1B4_1642	0.88	-0.2
1,886,021	-		Pf1N1B4_1642	0.88	+0.4
1,886,021	-		Pf1N1B4_1642	0.88	+1.2
1,886,061	+				-2.2
1,886,245	-		Pf1N1B4_1643	0.21	-0.9
1,886,245	-		Pf1N1B4_1643	0.21	+1.2
1,886,245	-		Pf1N1B4_1643	0.21	+2.5
1,886,245	-		Pf1N1B4_1643	0.21	+0.1
1,886,245	-		Pf1N1B4_1643	0.21	+0.2
1,886,245	-		Pf1N1B4_1643	0.21	-0.2
1,886,268	+		Pf1N1B4_1643	0.24	-0.3
1,886,268	+		Pf1N1B4_1643	0.24	-0.3
1,886,269	-		Pf1N1B4_1643	0.24	+0.6
1,886,269	-		Pf1N1B4_1643	0.24	-0.3
1,886,319	+		Pf1N1B4_1643	0.31	+0.1
1,886,319	+		Pf1N1B4_1643	0.31	+0.9
1,886,320	-		Pf1N1B4_1643	0.31	+0.1
1,886,320	-		Pf1N1B4_1643	0.31	+2.8
1,886,320	-		Pf1N1B4_1643	0.31	-0.3
1,886,320	-		Pf1N1B4_1643	0.31	+1.8
1,886,320	-		Pf1N1B4_1643	0.31	-0.8
1,886,322	+		Pf1N1B4_1643	0.32	-0.8
1,886,323	-		Pf1N1B4_1643	0.32	+0.4
1,886,323	-		Pf1N1B4_1643	0.32	-0.6