Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1612

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
1,857,184	+				-0.9
1,857,184	+				+1.3
1,857,185	-				+0.0
1,857,185	-				-0.3
1,857,185	-				+1.0
1,857,185	-				-0.3
1,857,185	-				-0.3
1,857,257	+				+0.6
1,857,257	+				+0.9
1,857,257	+				-1.3
1,857,257	+				+0.1
1,857,257	+				+2.0
1,857,257	+				-0.1
1,857,258	-				-0.3
1,857,262	-				+2.5
1,857,626	+				-0.2
1,857,627	-				-1.1
1,857,627	-				-2.3
1,857,653	+				+1.5
1,857,653	+				+0.5
1,857,653	+				-0.9
1,857,654	-				-1.8
1,857,654	-				+0.5
1,857,654	-				+0.6
1,857,654	-				-1.1
1,857,654	-				-1.3
1,857,708	+				+1.2
1,857,708	+				-1.8
1,857,734	+				-0.3
1,857,734	+				-0.3
1,857,734	+				-1.3
1,857,812	+				-0.8
1,857,812	+				-1.1
1,857,812	+				+0.3
1,857,813	-				+0.8
1,857,813	-				+0.0
1,857,813	-				+1.2
1,857,864	+				-0.7
1,857,865	-				+0.2
1,857,891	+				-0.8
1,857,891	+				-0.7
1,857,891	+				-1.0
1,857,891	+				+0.5
1,857,891	+				-0.2
1,857,891	+				-0.2
1,857,891	+				-0.6
1,857,892	-				+1.7
1,857,892	-				+1.2
1,857,892	-				-0.7
1,858,079	+		Pf1N1B4_1612	0.43	-0.8
1,858,080	-		Pf1N1B4_1612	0.43	-1.6
1,858,080	-		Pf1N1B4_1612	0.43	+0.4
1,858,265	+		Pf1N1B4_1612	0.85	-1.6
1,858,265	+		Pf1N1B4_1612	0.85	-1.0
1,858,265	+		Pf1N1B4_1612	0.85	+0.8
1,858,294	+				-0.1
1,858,312	+				-2.7
1,858,312	+				-1.6
1,858,313	-				+0.7
1,858,313	-				+1.5
1,858,489	-		Pf1N1B4_1613	0.35	+0.6
1,858,489	-		Pf1N1B4_1613	0.35	-1.6
1,858,489	-		Pf1N1B4_1613	0.35	+0.9
1,858,563	-		Pf1N1B4_1613	0.51	-0.0
1,858,752	+				-1.0
1,858,783	-				-1.1
1,859,025	+				+0.2
1,859,025	+				-0.3
1,859,025	+				+1.2
1,859,025	+				+0.2
1,859,025	+				-0.3
1,859,026	-				-0.3
1,859,026	-				-1.5
1,859,026	-				-0.8
1,859,026	-				-1.6
1,859,026	-				-0.2
1,859,026	-				-0.9
1,859,026	-				-0.1
1,859,026	-				+1.2
1,859,026	-				-1.1
1,859,026	-				-0.2
1,859,026	-				+2.5
1,859,026	-				-0.8
1,859,045	+		Pf1N1B4_1614	0.11	-0.8
1,859,045	+		Pf1N1B4_1614	0.11	+1.5
1,859,046	-		Pf1N1B4_1614	0.12	-1.6
1,859,046	-		Pf1N1B4_1614	0.12	-1.3
1,859,046	-		Pf1N1B4_1614	0.12	-0.3