Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1348

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
1,544,181	+				+0.4
1,544,181	+				-0.4
1,544,395	-				+1.5
1,544,584	+		Pf1N1B4_1347	0.31	-0.2
1,544,602	-		Pf1N1B4_1347	0.34	-0.8
1,544,943	+		Pf1N1B4_1347	0.83	-0.2
1,544,943	+		Pf1N1B4_1347	0.83	+0.2
1,544,943	+		Pf1N1B4_1347	0.83	-0.1
1,544,944	-		Pf1N1B4_1347	0.83	+2.0
1,544,944	-		Pf1N1B4_1347	0.83	+1.0
1,544,974	-		Pf1N1B4_1347	0.87	+0.9
1,544,974	-		Pf1N1B4_1347	0.87	+0.8
1,545,024	-				+2.5
1,545,024	-				+1.2
1,545,060	+				-0.8
1,545,087	-				-0.4
1,545,087	-				-0.6
1,545,101	+				+1.4
1,545,101	+				-0.4
1,545,101	+				+0.7
1,545,102	-				-1.7
1,545,102	-				+0.8
1,545,429	+		Pf1N1B4_1348	0.40	-0.1
1,545,429	+		Pf1N1B4_1348	0.40	+0.8
1,545,429	+		Pf1N1B4_1348	0.40	-1.1
1,545,459	+		Pf1N1B4_1348	0.43	-2.5
1,545,459	+		Pf1N1B4_1348	0.43	-0.4
1,545,776	+		Pf1N1B4_1348	0.81	-0.8
1,545,776	+		Pf1N1B4_1348	0.81	+0.6
1,545,776	+		Pf1N1B4_1348	0.81	-1.4
1,545,978	-				-0.6
1,545,978	-				+1.8
1,546,047	-				+0.0
1,546,067	-				-0.6
1,546,204	-		Pf1N1B4_1349	0.37	-1.3
1,546,410	+				+0.1
1,546,410	+				-1.1
1,546,411	-				+2.0
1,546,461	+		Pf1N1B4_1350	0.11	-0.8
1,546,461	+		Pf1N1B4_1350	0.11	-0.8
1,546,461	+		Pf1N1B4_1350	0.11	-0.2
1,546,461	+		Pf1N1B4_1350	0.11	-0.8
1,546,462	-		Pf1N1B4_1350	0.11	-1.1
1,546,598	-		Pf1N1B4_1350	0.36	+0.2
1,546,668	+		Pf1N1B4_1350	0.49	+0.0
1,546,669	-		Pf1N1B4_1350	0.50	+2.2
1,546,849	+		Pf1N1B4_1350	0.83	-0.4