Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1261

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
1,440,529	+		Pf1N1B4_1259	0.70	-1.7
1,440,529	+		Pf1N1B4_1259	0.70	+0.1
1,440,530	-		Pf1N1B4_1259	0.70	+1.8
1,440,624	+		Pf1N1B4_1259	0.78	-0.5
1,440,625	-		Pf1N1B4_1259	0.78	-1.7
1,440,745	-		Pf1N1B4_1259	0.88	-0.2
1,440,819	+				+1.3
1,440,820	-				+0.7
1,440,901	-				-1.2
1,440,901	-				+0.1
1,440,901	-				-1.2
1,440,970	+				+0.7
1,440,974	-				-1.2
1,441,000	+				+0.6
1,441,000	+				-0.5
1,441,300	+				+0.3
1,441,300	+				-1.7
1,441,300	+				-2.3
1,441,300	+				-0.4
1,441,300	+				-0.6
1,441,300	+				+0.4
1,441,300	+				-0.5
1,441,300	+				+0.3
1,441,300	+				-0.5
1,441,301	-				+0.8
1,441,301	-				+0.9
1,441,301	-				-1.9
1,441,301	-				-1.5
1,441,301	-				+2.7
1,441,301	-				+0.5
1,441,367	+		Pf1N1B4_1261	0.10	-0.5
1,441,367	+		Pf1N1B4_1261	0.10	+0.1
1,441,367	+		Pf1N1B4_1261	0.10	-0.5
1,441,367	+		Pf1N1B4_1261	0.10	-0.7
1,441,367	+		Pf1N1B4_1261	0.10	-0.7
1,441,368	-		Pf1N1B4_1261	0.11	+0.8
1,441,408	+				-0.5
1,441,471	+		Pf1N1B4_1261	0.38	-0.3
1,441,472	-		Pf1N1B4_1261	0.38	+1.0
1,441,472	-		Pf1N1B4_1261	0.38	-1.2
1,441,472	-		Pf1N1B4_1261	0.38	-2.3
1,441,488	-		Pf1N1B4_1261	0.42	+2.2
1,441,681	+				+1.1
1,441,681	+				+1.9
1,441,681	+				+0.7
1,441,681	+				-0.9
1,441,681	+				-1.7
1,441,681	+				-1.5
1,441,682	-				+0.5
1,441,682	-				-1.9
1,441,682	-				-0.0
1,441,682	-				+1.6
1,441,682	-				-0.1
1,441,682	-				-1.3
1,441,682	-				-0.9
1,441,875	-				+1.3
1,441,875	-				+1.7
1,441,875	-				-1.0
1,441,878	+				-0.9
1,441,878	+				-0.7
1,441,886	-				+1.5
1,442,299	-		Pf1N1B4_1262	0.17	+1.1
1,442,514	+		Pf1N1B4_1262	0.26	+0.4
1,442,514	+		Pf1N1B4_1262	0.26	+0.4
1,442,514	+		Pf1N1B4_1262	0.26	-1.9
1,442,514	+		Pf1N1B4_1262	0.26	+0.1
1,442,514	+		Pf1N1B4_1262	0.26	+1.5
1,442,514	+		Pf1N1B4_1262	0.26	+1.6
1,442,514	+		Pf1N1B4_1262	0.26	+0.5
1,442,514	+		Pf1N1B4_1262	0.26	-1.2
1,442,514	+		Pf1N1B4_1262	0.26	+0.1
1,442,514	+		Pf1N1B4_1262	0.26	+0.3
1,442,514	+		Pf1N1B4_1262	0.26	-1.2
1,442,515	-		Pf1N1B4_1262	0.26	-1.3
1,442,515	-		Pf1N1B4_1262	0.26	-1.0
1,442,515	-				+2.1
1,442,515	-		Pf1N1B4_1262	0.26	-0.5
1,442,515	-		Pf1N1B4_1262	0.26	+0.3
1,442,515	-		Pf1N1B4_1262	0.26	+0.4
1,442,515	-		Pf1N1B4_1262	0.26	+0.3
1,442,515	-		Pf1N1B4_1262	0.26	-0.7
1,442,646	+		Pf1N1B4_1262	0.31	-1.2
1,442,646	+		Pf1N1B4_1262	0.31	-0.9
1,442,646	+		Pf1N1B4_1262	0.31	+1.5
1,442,646	+		Pf1N1B4_1262	0.31	+0.5
1,442,646	+		Pf1N1B4_1262	0.31	+1.1
1,442,665	+		Pf1N1B4_1262	0.32	+0.7
1,442,694	+		Pf1N1B4_1262	0.33	+0.3
1,442,694	+		Pf1N1B4_1262	0.33	+0.3
1,442,694	+		Pf1N1B4_1262	0.33	+1.1
1,442,695	-		Pf1N1B4_1262	0.33	-1.5
1,442,695	-		Pf1N1B4_1262	0.33	+0.3
1,442,695	-		Pf1N1B4_1262	0.33	+0.7