Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1257

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
1,437,369	-		Pf1N1B4_1256	0.21	-1.0
1,437,385	+		Pf1N1B4_1256	0.22	-0.5
1,437,385	+		Pf1N1B4_1256	0.22	-0.1
1,437,386	-		Pf1N1B4_1256	0.23	+0.1
1,437,530	+		Pf1N1B4_1256	0.38	+0.7
1,437,611	+		Pf1N1B4_1256	0.47	-0.2
1,437,673	-		Pf1N1B4_1256	0.53	-1.2
1,437,903	+		Pf1N1B4_1256	0.78	+0.1
1,438,024	+				-0.5
1,438,024	+				-0.3
1,438,024	+				+1.0
1,438,024	+				+0.1
1,438,025	-				+0.6
1,438,161	+				-0.5
1,438,162	-				+1.3
1,438,162	-				-0.6
1,438,222	+				+2.1
1,438,223	-				-1.0
1,438,223	-				-0.5
1,438,238	+				-1.0
1,438,238	+				+0.3
1,438,238	+				+1.1
1,438,239	-				+0.0
1,438,239	-				-0.3
1,438,239	-				-0.6
1,438,241	+				+1.5
1,438,242	-				+0.1
1,438,242	-				+0.8
1,438,487	+		Pf1N1B4_1257	0.26	-2.0
1,438,558	+				+1.1
1,438,558	+		Pf1N1B4_1257	0.33	-1.2
1,439,033	+		Pf1N1B4_1257	0.80	-0.1
1,439,033	+		Pf1N1B4_1257	0.80	-0.3
1,439,034	-		Pf1N1B4_1257	0.80	-1.2
1,439,034	-		Pf1N1B4_1257	0.80	-1.7
1,439,034	-		Pf1N1B4_1257	0.80	-2.2
1,439,034	-		Pf1N1B4_1257	0.80	-1.3
1,439,034	-		Pf1N1B4_1257	0.80	+0.0
1,439,034	-		Pf1N1B4_1257	0.80	-0.4
1,439,034	-				+0.8
1,439,249	+				+1.9
1,439,290	-				-0.3
1,439,342	+				-0.9
1,439,342	+				+1.9
1,439,342	+				-2.5
1,439,343	-				-2.0
1,439,343	-				-0.0
1,439,366	+				+1.1
1,439,366	+				+0.4
1,439,366	+				+0.5
1,439,366	+				+1.1
1,439,366	+				+1.7
1,439,366	+				+0.1
1,439,366	+				-1.9
1,439,367	-				-0.5
1,439,367	-				+0.5
1,439,367	-				+0.2
1,439,426	+				-0.6
1,439,426	+				-0.3
1,439,427	-				+0.0
1,439,437	-				-0.9
1,439,465	+				+0.5
1,439,465	+				+1.4
1,439,465	+				+0.8
1,439,466	-				+0.1
1,439,466	-				-0.2
1,439,466	-				+1.1
1,439,466	-				-0.9
1,439,479	+				-0.7
1,439,479	+				-0.4
1,439,493	+				+0.7
1,439,494	-				-0.2
1,439,494	-				+1.7
1,439,524	+				+1.1
1,439,613	-		Pf1N1B4_1258	0.60	+0.4
1,439,613	-		Pf1N1B4_1258	0.60	-0.1
1,439,813	+		Pf1N1B4_1259	0.10	+1.5
1,439,814	-				+0.1
1,439,814	-		Pf1N1B4_1259	0.10	+0.5
1,439,936	+		Pf1N1B4_1259	0.21	-1.2
1,439,937	-		Pf1N1B4_1259	0.21	-0.5
1,439,937	-		Pf1N1B4_1259	0.21	-1.2
1,440,042	+		Pf1N1B4_1259	0.29	-2.0
1,440,042	+				-1.2
1,440,042	+		Pf1N1B4_1259	0.29	-0.5
1,440,043	-		Pf1N1B4_1259	0.29	+0.1
1,440,043	-		Pf1N1B4_1259	0.29	-0.3
1,440,043	-				+0.1
1,440,177	+		Pf1N1B4_1259	0.41	+1.1
1,440,178	-		Pf1N1B4_1259	0.41	-0.9
1,440,178	-		Pf1N1B4_1259	0.41	+0.7
1,440,213	+		Pf1N1B4_1259	0.44	-2.0
1,440,213	+		Pf1N1B4_1259	0.44	+1.2
1,440,214	-		Pf1N1B4_1259	0.44	+1.1