Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1153

Experiment: Rifampicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.004 mg/ml
1,299,893	+		Pf1N1B4_1152	0.71	-0.7
1,299,893	+		Pf1N1B4_1152	0.71	-1.9
1,299,894	-		Pf1N1B4_1152	0.71	-0.1
1,299,920	+		Pf1N1B4_1152	0.73	-1.5
1,299,920	+		Pf1N1B4_1152	0.73	-0.5
1,299,920	+		Pf1N1B4_1152	0.73	-0.5
1,299,920	+		Pf1N1B4_1152	0.73	+1.1
1,299,921	-		Pf1N1B4_1152	0.73	-1.2
1,299,921	-		Pf1N1B4_1152	0.73	-1.6
1,299,995	+		Pf1N1B4_1152	0.76	-1.2
1,299,996	-		Pf1N1B4_1152	0.76	-0.2
1,300,140	+		Pf1N1B4_1152	0.83	+0.1
1,300,140	+		Pf1N1B4_1152	0.83	-1.6
1,300,140	+		Pf1N1B4_1152	0.83	-1.2
1,300,141	-		Pf1N1B4_1152	0.83	-0.9
1,300,141	-		Pf1N1B4_1152	0.83	-1.9
1,300,141	-		Pf1N1B4_1152	0.83	+0.3
1,300,504	+				+0.5
1,300,504	+				+0.0
1,300,504	+				-0.5
1,300,504	+				-0.4
1,300,504	+				-2.6
1,300,504	+				+1.1
1,300,505	-				+0.4
1,300,505	-				-2.1
1,300,505	-				-1.4
1,300,559	-				-0.5
1,300,615	+				+2.7
1,300,615	+				+1.5
1,300,619	-				-0.3
1,300,644	+				+1.3
1,300,644	+				-1.7
1,300,644	+				+2.1
1,300,645	-				+1.1
1,300,645	-				-0.4
1,300,668	+				-0.9
1,300,720	+				-0.5
1,300,721	-				-0.4
1,300,728	+				+1.4
1,300,728	+				-0.5
1,300,729	-				-0.1
1,300,729	-				-1.2
1,300,745	+				-0.8
1,300,837	-				-3.0
1,300,837	-				+0.5
1,300,879	+				-0.4
1,300,880	-				-1.2
1,301,358	+		Pf1N1B4_1153	0.58	-0.8
1,301,358	+		Pf1N1B4_1153	0.58	-0.0
1,301,417	+		Pf1N1B4_1153	0.65	-1.1
1,301,615	+		Pf1N1B4_1153	0.88	-1.8
1,301,615	+		Pf1N1B4_1153	0.88	-1.5
1,301,616	-		Pf1N1B4_1153	0.88	-0.6
1,301,649	+				-0.9
1,301,649	+				-3.1
1,301,649	+				+0.8
1,301,651	+				-1.5
1,301,651	+				-1.5
1,301,652	-				-1.1
1,301,725	+				+0.7
1,301,725	+				-0.3
1,301,725	+				+0.4
1,301,732	+				+0.1
1,301,732	+				+0.3
1,301,737	+				+1.4
1,301,737	+				+0.7
1,301,737	+				-1.5
1,301,737	+				+0.8
1,301,738	-				-0.2
1,301,744	+				+1.1
1,301,744	+				-0.8
1,301,745	-				-1.0
1,301,767	+				+1.1
1,301,768	-				+0.1
1,301,811	-				-0.0
1,301,811	-				-0.5
1,301,811	-				-1.5
1,301,815	+				+0.1
1,301,816	-				+1.0
1,301,816	-				+0.8
1,301,816	-				+0.6
1,301,816	-				+0.1
1,301,829	+				-0.1
1,301,830	-				+1.7
1,301,852	+		Pf1N1B4_1154	0.17	+0.3
1,301,852	+		Pf1N1B4_1154	0.17	-0.9
1,301,853	-		Pf1N1B4_1154	0.17	-1.7
1,301,853	-		Pf1N1B4_1154	0.17	+0.4
1,301,853	-		Pf1N1B4_1154	0.17	+0.8
1,301,917	-		Pf1N1B4_1154	0.38	+0.7
1,301,917	-		Pf1N1B4_1154	0.38	-0.5
1,301,917	-		Pf1N1B4_1154	0.38	-0.5
1,301,917	-		Pf1N1B4_1154	0.38	+1.3
1,301,917	-		Pf1N1B4_1154	0.38	-2.2
1,302,052	-		Pf1N1B4_1154	0.82	+0.4
1,302,052	-		Pf1N1B4_1154	0.82	-0.8
1,302,052	-				+1.1
1,302,172	+				-2.0
1,302,172	+				+1.7
1,302,173	-				+0.1
1,302,173	-				+1.4
1,302,259	+				+0.2
1,302,260	-				+0.8
1,302,261	+				-2.2
1,302,261	+				-0.1
1,302,261	+				-0.5
1,302,261	+				-1.2
1,302,262	-				-0.9
1,302,262	-				+0.7
1,302,262	-				-0.7
1,302,262	-				-1.7
1,302,262	-				-1.3
1,302,262	-				+0.4
1,302,283	-				-1.6
1,302,283	-				+1.5
1,302,283	-				+1.1
1,302,294	+				-1.6
1,302,295	-				-0.1
1,302,295	-				-1.9
1,302,295	-				+1.5
1,302,295	-				-1.7
1,302,300	+				+0.0
1,302,300	+				+1.5
1,302,301	-				+1.1
1,302,301	-				+1.1
1,302,301	-				+0.3
1,302,308	-				+0.2
1,302,323	+				+0.4
1,302,323	+				+0.1
1,302,323	+				-0.6
1,302,323	+				-0.1
1,302,324	-				+2.3
1,302,324	-				-1.7
1,302,324	-				+0.2
1,302,348	+				-1.8
1,302,348	+				-0.5
1,302,348	+				-1.2
1,302,348	+				-1.5
1,302,348	+				+0.7
1,302,349	-				-0.9
1,302,349	-				-0.2
1,302,349	-				-1.1
1,302,349	-				-0.2
1,302,528	+		Pf1N1B4_1155	0.22	-1.2