Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS09735 and CA265_RS09740 are separated by 133 nucleotides CA265_RS09740 and CA265_RS09745 are separated by 79 nucleotides CA265_RS09745 and CA265_RS09750 are separated by 67 nucleotides CA265_RS09750 and CA265_RS09755 are separated by 125 nucleotides
CA265_RS09735: CA265_RS09735 - nuclease, at 2,402,099 to 2,402,449
_RS09735
CA265_RS09740: CA265_RS09740 - transcriptional regulator, at 2,402,583 to 2,403,359
_RS09740
CA265_RS09745: CA265_RS09745 - hypothetical protein, at 2,403,439 to 2,403,891
_RS09745
CA265_RS09750: CA265_RS09750 - SAM-dependent methyltransferase, at 2,403,959 to 2,404,693
_RS09750
CA265_RS09755: CA265_RS09755 - 8-amino-7-oxononanoate synthase, at 2,404,819 to 2,405,940
_RS09755
Position (kb)
2403
2404 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2402.484 kb on - strand at 2403.131 kb on + strand, within CA265_RS09740 at 2403.256 kb on + strand, within CA265_RS09740 at 2403.398 kb on + strand at 2403.403 kb on - strand at 2403.406 kb on + strand at 2403.436 kb on - strand at 2403.473 kb on + strand at 2403.889 kb on + strand at 2403.894 kb on - strand at 2403.983 kb on + strand at 2404.092 kb on - strand, within CA265_RS09750 at 2404.092 kb on - strand, within CA265_RS09750 at 2404.126 kb on - strand, within CA265_RS09750 at 2404.292 kb on + strand, within CA265_RS09750 at 2404.293 kb on - strand, within CA265_RS09750 at 2404.364 kb on + strand, within CA265_RS09750 at 2404.413 kb on - strand, within CA265_RS09750 at 2404.425 kb on - strand, within CA265_RS09750 at 2404.466 kb on - strand, within CA265_RS09750 at 2404.678 kb on - strand at 2404.750 kb on - strand at 2404.750 kb on - strand at 2404.750 kb on - strand at 2404.751 kb on + strand at 2404.751 kb on + strand at 2404.869 kb on + strand at 2404.890 kb on - strand at 2404.890 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 2,402,484 - +0.7 2,403,131 + CA265_RS09740 0.71 -0.6 2,403,256 + CA265_RS09740 0.87 -0.5 2,403,398 + +0.3 2,403,403 - -0.6 2,403,406 + -1.1 2,403,436 - -0.2 2,403,473 + +2.2 2,403,889 + +0.3 2,403,894 - +0.7 2,403,983 + +0.3 2,404,092 - CA265_RS09750 0.18 +4.1 2,404,092 - CA265_RS09750 0.18 -0.7 2,404,126 - CA265_RS09750 0.23 -0.7 2,404,292 + CA265_RS09750 0.45 +0.3 2,404,293 - CA265_RS09750 0.45 -1.2 2,404,364 + CA265_RS09750 0.55 +0.2 2,404,413 - CA265_RS09750 0.62 -0.4 2,404,425 - CA265_RS09750 0.63 -0.4 2,404,466 - CA265_RS09750 0.69 -0.2 2,404,678 - -0.0 2,404,750 - -1.6 2,404,750 - -1.3 2,404,750 - +0.6 2,404,751 + -0.0 2,404,751 + -0.0 2,404,869 + +0.3 2,404,890 - -0.1 2,404,890 - +0.2
Or see this region's nucleotide sequence