Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29000 and AO356_29005 are separated by 66 nucleotides AO356_29005 and AO356_29010 are separated by 78 nucleotides
AO356_29000: AO356_29000 - ABC transporter permease, at 6,740,374 to 6,741,708
_29000
AO356_29005: AO356_29005 - ABC transporter permease, at 6,741,775 to 6,743,115
_29005
AO356_29010: AO356_29010 - ABC transporter permease, at 6,743,194 to 6,744,258
_29010
Position (kb)
6741
6742
6743
6744 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6741.243 kb on - strand, within AO356_29000 at 6741.308 kb on + strand, within AO356_29000 at 6741.362 kb on + strand, within AO356_29000 at 6741.434 kb on + strand, within AO356_29000 at 6741.527 kb on + strand, within AO356_29000 at 6741.528 kb on - strand, within AO356_29000 at 6741.652 kb on - strand at 6741.653 kb on + strand at 6741.712 kb on + strand at 6741.807 kb on + strand at 6741.808 kb on - strand at 6742.139 kb on + strand, within AO356_29005 at 6742.140 kb on - strand, within AO356_29005 at 6742.140 kb on - strand, within AO356_29005 at 6742.140 kb on - strand, within AO356_29005 at 6742.143 kb on - strand, within AO356_29005 at 6742.158 kb on - strand, within AO356_29005 at 6742.500 kb on - strand, within AO356_29005 at 6742.545 kb on - strand, within AO356_29005 at 6742.619 kb on + strand, within AO356_29005 at 6742.619 kb on + strand, within AO356_29005 at 6742.646 kb on + strand, within AO356_29005 at 6742.649 kb on + strand, within AO356_29005 at 6742.829 kb on + strand, within AO356_29005 at 6742.829 kb on + strand, within AO356_29005 at 6743.040 kb on + strand at 6743.110 kb on - strand at 6743.123 kb on - strand at 6743.123 kb on - strand at 6743.579 kb on + strand, within AO356_29010 at 6743.792 kb on + strand, within AO356_29010 at 6743.792 kb on + strand, within AO356_29010 at 6743.792 kb on + strand, within AO356_29010 at 6743.793 kb on - strand, within AO356_29010 at 6743.793 kb on - strand, within AO356_29010 at 6743.798 kb on + strand, within AO356_29010 at 6743.798 kb on + strand, within AO356_29010 at 6743.799 kb on - strand, within AO356_29010 at 6743.867 kb on + strand, within AO356_29010 at 6743.988 kb on - strand, within AO356_29010 at 6743.988 kb on - strand, within AO356_29010
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 6,741,243 - AO356_29000 0.65 -1.0 6,741,308 + AO356_29000 0.70 +0.5 6,741,362 + AO356_29000 0.74 -0.7 6,741,434 + AO356_29000 0.79 -0.5 6,741,527 + AO356_29000 0.86 +0.5 6,741,528 - AO356_29000 0.86 -0.3 6,741,652 - -1.7 6,741,653 + -0.9 6,741,712 + -2.7 6,741,807 + -0.1 6,741,808 - -0.4 6,742,139 + AO356_29005 0.27 -0.1 6,742,140 - AO356_29005 0.27 -1.1 6,742,140 - AO356_29005 0.27 +0.3 6,742,140 - AO356_29005 0.27 -2.7 6,742,143 - AO356_29005 0.27 -0.3 6,742,158 - AO356_29005 0.29 +0.9 6,742,500 - AO356_29005 0.54 +0.9 6,742,545 - AO356_29005 0.57 +0.9 6,742,619 + AO356_29005 0.63 -1.8 6,742,619 + AO356_29005 0.63 -1.7 6,742,646 + AO356_29005 0.65 +0.5 6,742,649 + AO356_29005 0.65 -1.1 6,742,829 + AO356_29005 0.79 +0.5 6,742,829 + AO356_29005 0.79 -1.1 6,743,040 + -0.1 6,743,110 - -1.9 6,743,123 - +2.0 6,743,123 - -0.7 6,743,579 + AO356_29010 0.36 -0.1 6,743,792 + AO356_29010 0.56 +0.5 6,743,792 + AO356_29010 0.56 +1.2 6,743,792 + AO356_29010 0.56 +0.9 6,743,793 - AO356_29010 0.56 -0.3 6,743,793 - AO356_29010 0.56 +0.3 6,743,798 + AO356_29010 0.57 -2.7 6,743,798 + AO356_29010 0.57 -0.1 6,743,799 - AO356_29010 0.57 +0.2 6,743,867 + AO356_29010 0.63 -0.1 6,743,988 - AO356_29010 0.75 -1.1 6,743,988 - AO356_29010 0.75 -0.1
Or see this region's nucleotide sequence