Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27565 and AO356_27570 are separated by 135 nucleotides AO356_27570 and AO356_27575 are separated by 56 nucleotides
AO356_27565: AO356_27565 - RND transporter, at 6,288,915 to 6,290,378
_27565
AO356_27570: AO356_27570 - short-chain dehydrogenase, at 6,290,514 to 6,291,299
_27570
AO356_27575: AO356_27575 - Long-chain fatty acid transport protein, at 6,291,356 to 6,292,627
_27575
Position (kb)
6290
6291
6292 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6289.566 kb on + strand, within AO356_27565 at 6289.872 kb on + strand, within AO356_27565 at 6289.873 kb on - strand, within AO356_27565 at 6289.873 kb on - strand, within AO356_27565 at 6290.514 kb on - strand at 6290.589 kb on + strand at 6290.590 kb on - strand at 6290.760 kb on - strand, within AO356_27570 at 6290.760 kb on - strand, within AO356_27570 at 6290.859 kb on - strand, within AO356_27570 at 6290.952 kb on + strand, within AO356_27570 at 6290.997 kb on + strand, within AO356_27570 at 6290.997 kb on + strand, within AO356_27570 at 6290.998 kb on - strand, within AO356_27570 at 6290.998 kb on - strand, within AO356_27570 at 6290.998 kb on - strand, within AO356_27570 at 6290.998 kb on - strand, within AO356_27570 at 6290.998 kb on - strand, within AO356_27570 at 6291.358 kb on - strand at 6291.379 kb on + strand at 6291.417 kb on + strand at 6291.418 kb on - strand at 6291.471 kb on + strand at 6291.471 kb on + strand at 6291.472 kb on - strand at 6291.472 kb on - strand at 6291.472 kb on - strand at 6291.638 kb on - strand, within AO356_27575 at 6291.639 kb on + strand, within AO356_27575 at 6291.640 kb on - strand, within AO356_27575 at 6291.789 kb on + strand, within AO356_27575 at 6291.790 kb on - strand, within AO356_27575 at 6291.848 kb on - strand, within AO356_27575 at 6291.870 kb on + strand, within AO356_27575 at 6291.940 kb on - strand, within AO356_27575 at 6291.957 kb on + strand, within AO356_27575 at 6291.957 kb on + strand, within AO356_27575 at 6291.958 kb on - strand, within AO356_27575 at 6292.057 kb on + strand, within AO356_27575 at 6292.108 kb on + strand, within AO356_27575 at 6292.109 kb on - strand, within AO356_27575 at 6292.109 kb on - strand, within AO356_27575 at 6292.158 kb on + strand, within AO356_27575 at 6292.213 kb on - strand, within AO356_27575 at 6292.263 kb on + strand, within AO356_27575 at 6292.264 kb on - strand, within AO356_27575
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 6,289,566 + AO356_27565 0.44 -0.5 6,289,872 + AO356_27565 0.65 -2.3 6,289,873 - AO356_27565 0.65 -0.3 6,289,873 - AO356_27565 0.65 -2.3 6,290,514 - -1.3 6,290,589 + -0.7 6,290,590 - -1.3 6,290,760 - AO356_27570 0.31 +0.5 6,290,760 - AO356_27570 0.31 +0.3 6,290,859 - AO356_27570 0.44 +1.2 6,290,952 + AO356_27570 0.56 -2.1 6,290,997 + AO356_27570 0.61 -1.6 6,290,997 + AO356_27570 0.61 -0.6 6,290,998 - AO356_27570 0.62 -1.3 6,290,998 - AO356_27570 0.62 -1.9 6,290,998 - AO356_27570 0.62 +0.3 6,290,998 - AO356_27570 0.62 -0.1 6,290,998 - AO356_27570 0.62 +0.0 6,291,358 - +0.4 6,291,379 + -0.5 6,291,417 + -0.1 6,291,418 - -1.3 6,291,471 + -1.3 6,291,471 + -0.3 6,291,472 - -0.9 6,291,472 - -0.7 6,291,472 - +0.5 6,291,638 - AO356_27575 0.22 +1.7 6,291,639 + AO356_27575 0.22 +1.6 6,291,640 - AO356_27575 0.22 -1.3 6,291,789 + AO356_27575 0.34 +0.3 6,291,790 - AO356_27575 0.34 -0.1 6,291,848 - AO356_27575 0.39 -0.7 6,291,870 + AO356_27575 0.40 +1.0 6,291,940 - AO356_27575 0.46 +1.0 6,291,957 + AO356_27575 0.47 +0.3 6,291,957 + AO356_27575 0.47 +1.3 6,291,958 - AO356_27575 0.47 -0.9 6,292,057 + AO356_27575 0.55 +0.0 6,292,108 + AO356_27575 0.59 -0.3 6,292,109 - AO356_27575 0.59 -1.3 6,292,109 - AO356_27575 0.59 +1.9 6,292,158 + AO356_27575 0.63 -2.0 6,292,213 - AO356_27575 0.67 -2.6 6,292,263 + AO356_27575 0.71 +1.0 6,292,264 - AO356_27575 0.71 +0.5
Or see this region's nucleotide sequence