Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26970 and AO356_26975 are separated by 12 nucleotides AO356_26975 and AO356_26980 are separated by 153 nucleotides AO356_26980 and AO356_26985 are separated by 121 nucleotides
AO356_26970: AO356_26970 - sodium:proton antiporter, at 6,141,704 to 6,143,041
_26970
AO356_26975: AO356_26975 - hypothetical protein, at 6,143,054 to 6,143,590
_26975
AO356_26980: AO356_26980 - amino acid transporter, at 6,143,744 to 6,143,974
_26980
AO356_26985: AO356_26985 - histidine kinase, at 6,144,096 to 6,146,024
_26985
Position (kb)
6143
6144 Strain fitness (log2 ratio)
-2
-1
0
1 at 6142.397 kb on + strand, within AO356_26970 at 6142.398 kb on - strand, within AO356_26970 at 6142.428 kb on - strand, within AO356_26970 at 6142.886 kb on + strand, within AO356_26970 at 6142.887 kb on - strand, within AO356_26970 at 6142.887 kb on - strand, within AO356_26970 at 6143.015 kb on + strand at 6143.015 kb on + strand at 6143.015 kb on + strand at 6143.015 kb on + strand at 6143.016 kb on - strand at 6143.016 kb on - strand at 6143.016 kb on - strand at 6143.016 kb on - strand at 6143.016 kb on - strand at 6143.082 kb on + strand at 6143.082 kb on + strand at 6143.083 kb on - strand at 6143.083 kb on - strand at 6143.083 kb on - strand at 6143.442 kb on + strand, within AO356_26975 at 6143.443 kb on - strand, within AO356_26975 at 6143.479 kb on - strand, within AO356_26975 at 6143.496 kb on + strand, within AO356_26975 at 6143.496 kb on + strand, within AO356_26975 at 6143.497 kb on - strand, within AO356_26975 at 6143.717 kb on - strand at 6143.717 kb on - strand at 6143.717 kb on - strand at 6143.717 kb on - strand at 6143.722 kb on + strand at 6143.854 kb on + strand, within AO356_26980 at 6143.866 kb on + strand, within AO356_26980 at 6143.866 kb on + strand, within AO356_26980 at 6143.867 kb on - strand, within AO356_26980 at 6143.894 kb on - strand, within AO356_26980 at 6143.903 kb on + strand, within AO356_26980 at 6143.904 kb on - strand, within AO356_26980 at 6143.904 kb on - strand, within AO356_26980 at 6143.904 kb on - strand, within AO356_26980 at 6143.904 kb on - strand, within AO356_26980 at 6143.972 kb on + strand at 6144.042 kb on + strand at 6144.097 kb on + strand at 6144.097 kb on + strand at 6144.097 kb on + strand at 6144.098 kb on - strand at 6144.197 kb on - strand at 6144.322 kb on + strand, within AO356_26985 at 6144.323 kb on - strand, within AO356_26985 at 6144.405 kb on + strand, within AO356_26985 at 6144.552 kb on + strand, within AO356_26985
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 6,142,397 + AO356_26970 0.52 -0.3 6,142,398 - AO356_26970 0.52 -0.4 6,142,428 - AO356_26970 0.54 -1.3 6,142,886 + AO356_26970 0.88 -0.6 6,142,887 - AO356_26970 0.88 +1.0 6,142,887 - AO356_26970 0.88 -1.3 6,143,015 + +0.7 6,143,015 + -0.3 6,143,015 + +0.3 6,143,015 + -1.3 6,143,016 - -1.3 6,143,016 - +0.6 6,143,016 - -1.3 6,143,016 - +0.3 6,143,016 - -0.6 6,143,082 + -0.6 6,143,082 + +0.3 6,143,083 - +0.3 6,143,083 - -1.1 6,143,083 - -0.3 6,143,442 + AO356_26975 0.72 +0.3 6,143,443 - AO356_26975 0.72 +1.7 6,143,479 - AO356_26975 0.79 -0.6 6,143,496 + AO356_26975 0.82 +0.7 6,143,496 + AO356_26975 0.82 +0.5 6,143,497 - AO356_26975 0.82 -0.6 6,143,717 - -2.3 6,143,717 - -0.9 6,143,717 - -0.3 6,143,717 - +0.9 6,143,722 + +0.1 6,143,854 + AO356_26980 0.48 -0.1 6,143,866 + AO356_26980 0.53 -0.3 6,143,866 + AO356_26980 0.53 +0.3 6,143,867 - AO356_26980 0.53 +0.9 6,143,894 - AO356_26980 0.65 -0.3 6,143,903 + AO356_26980 0.69 +0.0 6,143,904 - AO356_26980 0.69 +0.4 6,143,904 - AO356_26980 0.69 -1.6 6,143,904 - AO356_26980 0.69 -0.5 6,143,904 - AO356_26980 0.69 +1.0 6,143,972 + -1.9 6,144,042 + +1.0 6,144,097 + -0.7 6,144,097 + -0.7 6,144,097 + -0.3 6,144,098 - +0.5 6,144,197 - +0.7 6,144,322 + AO356_26985 0.12 +1.3 6,144,323 - AO356_26985 0.12 +1.0 6,144,405 + AO356_26985 0.16 +0.0 6,144,552 + AO356_26985 0.24 -2.3
Or see this region's nucleotide sequence