Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26365 and AO356_26370 are separated by 3 nucleotides AO356_26370 and AO356_26375 are separated by 133 nucleotides
AO356_26365: AO356_26365 - acyl-CoA dehydrogenase, at 5,971,657 to 5,972,808
_26365
AO356_26370: AO356_26370 - crotonase, at 5,972,812 to 5,973,918
_26370
AO356_26375: AO356_26375 - hypothetical protein, at 5,974,052 to 5,974,759
_26375
Position (kb) 5972
5973
5974 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5972.239 kb on - strand, within AO356_26365 at 5972.609 kb on + strand, within AO356_26365 at 5972.609 kb on + strand, within AO356_26365 at 5972.619 kb on - strand, within AO356_26365 at 5972.673 kb on + strand, within AO356_26365 at 5972.674 kb on - strand, within AO356_26365 at 5972.674 kb on - strand, within AO356_26365 at 5973.326 kb on + strand, within AO356_26370 at 5973.326 kb on + strand, within AO356_26370 at 5973.347 kb on + strand, within AO356_26370 at 5973.347 kb on + strand, within AO356_26370 at 5973.348 kb on - strand, within AO356_26370 at 5973.348 kb on - strand, within AO356_26370 at 5973.348 kb on - strand, within AO356_26370 at 5973.374 kb on - strand, within AO356_26370 at 5973.392 kb on + strand, within AO356_26370 at 5973.392 kb on + strand, within AO356_26370 at 5973.393 kb on - strand, within AO356_26370 at 5973.393 kb on - strand, within AO356_26370 at 5973.428 kb on + strand, within AO356_26370 at 5973.428 kb on + strand, within AO356_26370 at 5973.428 kb on + strand, within AO356_26370 at 5973.609 kb on - strand, within AO356_26370 at 5973.675 kb on + strand, within AO356_26370 at 5973.718 kb on + strand, within AO356_26370 at 5974.032 kb on + strand at 5974.033 kb on - strand at 5974.033 kb on - strand at 5974.036 kb on + strand at 5974.036 kb on + strand at 5974.036 kb on + strand at 5974.036 kb on + strand at 5974.036 kb on + strand at 5974.036 kb on + strand at 5974.036 kb on + strand at 5974.036 kb on + strand at 5974.037 kb on - strand at 5974.181 kb on - strand, within AO356_26375 at 5974.181 kb on - strand, within AO356_26375 at 5974.232 kb on + strand, within AO356_26375 at 5974.291 kb on - strand, within AO356_26375 at 5974.658 kb on + strand, within AO356_26375 at 5974.658 kb on + strand, within AO356_26375 at 5974.659 kb on - strand, within AO356_26375 at 5974.881 kb on + strand at 5974.882 kb on - strand at 5974.894 kb on + strand at 5974.895 kb on - strand at 5974.895 kb on - strand at 5974.895 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 5,972,239 - AO356_26365 0.51 -0.3 5,972,609 + AO356_26365 0.83 +0.5 5,972,609 + AO356_26365 0.83 +0.7 5,972,619 - AO356_26365 0.84 -1.3 5,972,673 + AO356_26365 0.88 +1.3 5,972,674 - AO356_26365 0.88 -0.7 5,972,674 - AO356_26365 0.88 +0.3 5,973,326 + AO356_26370 0.46 +0.7 5,973,326 + AO356_26370 0.46 -2.9 5,973,347 + AO356_26370 0.48 -1.3 5,973,347 + AO356_26370 0.48 -1.3 5,973,348 - AO356_26370 0.48 -0.7 5,973,348 - AO356_26370 0.48 +0.3 5,973,348 - AO356_26370 0.48 -1.3 5,973,374 - AO356_26370 0.51 -1.9 5,973,392 + AO356_26370 0.52 -0.3 5,973,392 + AO356_26370 0.52 +0.7 5,973,393 - AO356_26370 0.52 -1.3 5,973,393 - AO356_26370 0.52 +0.1 5,973,428 + AO356_26370 0.56 -0.3 5,973,428 + AO356_26370 0.56 -0.3 5,973,428 + AO356_26370 0.56 +0.3 5,973,609 - AO356_26370 0.72 -1.9 5,973,675 + AO356_26370 0.78 -0.9 5,973,718 + AO356_26370 0.82 -0.3 5,974,032 + -0.3 5,974,033 - -0.3 5,974,033 - -0.1 5,974,036 + +0.7 5,974,036 + -0.2 5,974,036 + -2.3 5,974,036 + +0.3 5,974,036 + -1.3 5,974,036 + +1.0 5,974,036 + +0.7 5,974,036 + -1.3 5,974,037 - -1.3 5,974,181 - AO356_26375 0.18 +0.3 5,974,181 - AO356_26375 0.18 -0.3 5,974,232 + AO356_26375 0.25 -0.3 5,974,291 - AO356_26375 0.34 +0.5 5,974,658 + AO356_26375 0.86 -1.3 5,974,658 + AO356_26375 0.86 +1.0 5,974,659 - AO356_26375 0.86 -0.3 5,974,881 + -1.5 5,974,882 - -1.3 5,974,894 + -0.5 5,974,895 - -0.3 5,974,895 - +0.8 5,974,895 - -0.3
Or see this region's nucleotide sequence