Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25830 and AO356_25835 are separated by 22 nucleotides AO356_25835 and AO356_25840 overlap by 4 nucleotides AO356_25840 and AO356_25845 are separated by 206 nucleotides
AO356_25830: AO356_25830 - DNA repair protein, at 5,840,841 to 5,841,488
_25830
AO356_25835: AO356_25835 - hypothetical protein, at 5,841,511 to 5,841,990
_25835
AO356_25840: AO356_25840 - peptidylprolyl isomerase, at 5,841,987 to 5,842,931
_25840
AO356_25845: AO356_25845 - LysR family transcriptional regulator, at 5,843,138 to 5,844,118
_25845
Position (kb) 5841
5842
5843 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5841.310 kb on - strand, within AO356_25830 at 5841.310 kb on - strand, within AO356_25830 at 5841.901 kb on + strand, within AO356_25835 at 5841.902 kb on - strand, within AO356_25835 at 5841.913 kb on + strand, within AO356_25835 at 5841.913 kb on + strand, within AO356_25835 at 5842.363 kb on - strand, within AO356_25840 at 5842.363 kb on - strand, within AO356_25840 at 5842.425 kb on + strand, within AO356_25840 at 5842.425 kb on + strand, within AO356_25840 at 5842.852 kb on - strand at 5843.075 kb on + strand at 5843.085 kb on + strand at 5843.085 kb on + strand at 5843.096 kb on + strand at 5843.110 kb on + strand at 5843.110 kb on + strand at 5843.111 kb on - strand at 5843.116 kb on + strand at 5843.180 kb on + strand at 5843.711 kb on + strand, within AO356_25845 at 5843.711 kb on + strand, within AO356_25845 at 5843.711 kb on + strand, within AO356_25845 at 5843.712 kb on - strand, within AO356_25845 at 5843.712 kb on - strand, within AO356_25845 at 5843.712 kb on - strand, within AO356_25845 at 5843.783 kb on + strand, within AO356_25845 at 5843.784 kb on - strand, within AO356_25845 at 5843.847 kb on + strand, within AO356_25845 at 5843.847 kb on + strand, within AO356_25845 at 5843.847 kb on + strand, within AO356_25845 at 5843.847 kb on + strand, within AO356_25845 at 5843.848 kb on - strand, within AO356_25845 at 5843.848 kb on - strand, within AO356_25845 at 5843.848 kb on - strand, within AO356_25845
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 5,841,310 - AO356_25830 0.72 -3.3 5,841,310 - AO356_25830 0.72 -1.3 5,841,901 + AO356_25835 0.81 -1.3 5,841,902 - AO356_25835 0.81 -0.3 5,841,913 + AO356_25835 0.84 +0.3 5,841,913 + AO356_25835 0.84 +1.3 5,842,363 - AO356_25840 0.40 -1.3 5,842,363 - AO356_25840 0.40 -0.7 5,842,425 + AO356_25840 0.46 +0.3 5,842,425 + AO356_25840 0.46 -2.8 5,842,852 - -2.3 5,843,075 + +0.6 5,843,085 + -2.3 5,843,085 + +1.6 5,843,096 + -2.3 5,843,110 + +0.6 5,843,110 + +1.1 5,843,111 - -1.3 5,843,116 + -0.3 5,843,180 + +0.6 5,843,711 + AO356_25845 0.58 +2.3 5,843,711 + AO356_25845 0.58 +0.3 5,843,711 + AO356_25845 0.58 -1.5 5,843,712 - AO356_25845 0.59 -0.6 5,843,712 - AO356_25845 0.59 -1.3 5,843,712 - AO356_25845 0.59 -0.3 5,843,783 + AO356_25845 0.66 +0.7 5,843,784 - AO356_25845 0.66 -0.3 5,843,847 + AO356_25845 0.72 -1.3 5,843,847 + AO356_25845 0.72 -0.1 5,843,847 + AO356_25845 0.72 +0.1 5,843,847 + AO356_25845 0.72 -0.3 5,843,848 - AO356_25845 0.72 -0.5 5,843,848 - AO356_25845 0.72 -0.9 5,843,848 - AO356_25845 0.72 -0.7
Or see this region's nucleotide sequence