Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25770 and AO356_25775 are separated by 44 nucleotides AO356_25775 and AO356_25780 are separated by 205 nucleotides AO356_25780 and AO356_25785 are separated by 504 nucleotides
AO356_25770: AO356_25770 - 3-oxoadipate enol-lactonase, at 5,826,337 to 5,827,170
_25770
AO356_25775: AO356_25775 - peptide synthetase, at 5,827,215 to 5,827,805
_25775
AO356_25780: AO356_25780 - hypothetical protein, at 5,828,011 to 5,829,498
_25780
AO356_25785: AO356_25785 - hypothetical protein, at 5,830,003 to 5,831,412
_25785
Position (kb) 5828
5829
5830 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5827.127 kb on + strand at 5827.128 kb on - strand at 5827.255 kb on + strand at 5827.255 kb on + strand at 5827.255 kb on + strand at 5827.256 kb on - strand at 5827.363 kb on + strand, within AO356_25775 at 5827.363 kb on + strand, within AO356_25775 at 5827.363 kb on + strand, within AO356_25775 at 5827.363 kb on + strand, within AO356_25775 at 5827.364 kb on - strand, within AO356_25775 at 5827.565 kb on - strand, within AO356_25775 at 5827.774 kb on + strand at 5827.774 kb on + strand at 5827.774 kb on + strand at 5827.774 kb on + strand at 5827.775 kb on - strand at 5827.788 kb on - strand at 5827.827 kb on - strand at 5828.068 kb on + strand at 5828.069 kb on - strand at 5828.069 kb on - strand at 5828.269 kb on + strand, within AO356_25780 at 5828.270 kb on - strand, within AO356_25780 at 5828.395 kb on + strand, within AO356_25780 at 5828.396 kb on - strand, within AO356_25780 at 5828.396 kb on - strand, within AO356_25780 at 5828.396 kb on - strand, within AO356_25780 at 5828.396 kb on - strand, within AO356_25780 at 5828.396 kb on - strand, within AO356_25780 at 5828.398 kb on + strand, within AO356_25780 at 5828.399 kb on - strand, within AO356_25780 at 5828.401 kb on + strand, within AO356_25780 at 5828.413 kb on + strand, within AO356_25780 at 5828.413 kb on + strand, within AO356_25780 at 5828.413 kb on + strand, within AO356_25780 at 5828.414 kb on - strand, within AO356_25780 at 5828.486 kb on - strand, within AO356_25780 at 5828.530 kb on + strand, within AO356_25780 at 5828.531 kb on - strand, within AO356_25780 at 5828.531 kb on - strand, within AO356_25780 at 5828.637 kb on + strand, within AO356_25780 at 5828.637 kb on + strand, within AO356_25780 at 5828.875 kb on + strand, within AO356_25780 at 5828.876 kb on - strand, within AO356_25780 at 5828.876 kb on - strand, within AO356_25780 at 5828.876 kb on - strand, within AO356_25780 at 5828.876 kb on - strand, within AO356_25780 at 5828.988 kb on + strand, within AO356_25780 at 5828.988 kb on + strand, within AO356_25780 at 5829.116 kb on - strand, within AO356_25780 at 5829.152 kb on + strand, within AO356_25780 at 5829.394 kb on - strand at 5829.634 kb on + strand at 5829.797 kb on + strand at 5829.832 kb on + strand at 5829.833 kb on - strand at 5829.833 kb on - strand at 5829.837 kb on - strand at 5829.926 kb on + strand at 5829.980 kb on + strand at 5830.030 kb on + strand at 5830.061 kb on - strand at 5830.306 kb on + strand, within AO356_25785 at 5830.307 kb on - strand, within AO356_25785 at 5830.307 kb on - strand, within AO356_25785 at 5830.307 kb on - strand, within AO356_25785 at 5830.307 kb on - strand, within AO356_25785 at 5830.414 kb on + strand, within AO356_25785 at 5830.414 kb on + strand, within AO356_25785 at 5830.415 kb on - strand, within AO356_25785 at 5830.415 kb on - strand, within AO356_25785 at 5830.415 kb on - strand, within AO356_25785 at 5830.463 kb on - strand, within AO356_25785 at 5830.465 kb on + strand, within AO356_25785 at 5830.466 kb on - strand, within AO356_25785 at 5830.466 kb on - strand, within AO356_25785
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 5,827,127 + +1.9 5,827,128 - -0.3 5,827,255 + -0.3 5,827,255 + +1.1 5,827,255 + -2.3 5,827,256 - -0.3 5,827,363 + AO356_25775 0.25 +0.3 5,827,363 + AO356_25775 0.25 -0.7 5,827,363 + AO356_25775 0.25 +0.0 5,827,363 + AO356_25775 0.25 +1.3 5,827,364 - AO356_25775 0.25 -0.3 5,827,565 - AO356_25775 0.59 +0.3 5,827,774 + -0.9 5,827,774 + -0.0 5,827,774 + +1.9 5,827,774 + -0.9 5,827,775 - +0.7 5,827,788 - -0.1 5,827,827 - -1.3 5,828,068 + +0.2 5,828,069 - -1.3 5,828,069 - +1.1 5,828,269 + AO356_25780 0.17 -0.3 5,828,270 - AO356_25780 0.17 -0.6 5,828,395 + AO356_25780 0.26 -0.6 5,828,396 - AO356_25780 0.26 +0.7 5,828,396 - AO356_25780 0.26 +0.0 5,828,396 - AO356_25780 0.26 -0.3 5,828,396 - AO356_25780 0.26 +0.3 5,828,396 - AO356_25780 0.26 -0.3 5,828,398 + AO356_25780 0.26 -0.7 5,828,399 - AO356_25780 0.26 +1.5 5,828,401 + AO356_25780 0.26 -0.5 5,828,413 + AO356_25780 0.27 +0.1 5,828,413 + AO356_25780 0.27 -1.3 5,828,413 + AO356_25780 0.27 +1.4 5,828,414 - AO356_25780 0.27 -0.3 5,828,486 - AO356_25780 0.32 -1.3 5,828,530 + AO356_25780 0.35 -0.6 5,828,531 - AO356_25780 0.35 +0.6 5,828,531 - AO356_25780 0.35 +0.3 5,828,637 + AO356_25780 0.42 -0.7 5,828,637 + AO356_25780 0.42 +0.5 5,828,875 + AO356_25780 0.58 +1.2 5,828,876 - AO356_25780 0.58 +0.7 5,828,876 - AO356_25780 0.58 +0.3 5,828,876 - AO356_25780 0.58 -0.8 5,828,876 - AO356_25780 0.58 +0.3 5,828,988 + AO356_25780 0.66 +1.9 5,828,988 + AO356_25780 0.66 -0.3 5,829,116 - AO356_25780 0.74 +0.5 5,829,152 + AO356_25780 0.77 -1.8 5,829,394 - -0.3 5,829,634 + -0.7 5,829,797 + +1.5 5,829,832 + +1.3 5,829,833 - +0.6 5,829,833 - +2.2 5,829,837 - -2.8 5,829,926 + +1.3 5,829,980 + +0.9 5,830,030 + +1.3 5,830,061 - -0.7 5,830,306 + AO356_25785 0.21 +0.3 5,830,307 - AO356_25785 0.22 +0.1 5,830,307 - AO356_25785 0.22 -0.3 5,830,307 - AO356_25785 0.22 -0.7 5,830,307 - AO356_25785 0.22 +1.1 5,830,414 + AO356_25785 0.29 -1.3 5,830,414 + AO356_25785 0.29 +1.5 5,830,415 - AO356_25785 0.29 +0.7 5,830,415 - AO356_25785 0.29 +0.3 5,830,415 - AO356_25785 0.29 +0.9 5,830,463 - AO356_25785 0.33 +1.5 5,830,465 + AO356_25785 0.33 -0.5 5,830,466 - AO356_25785 0.33 -0.3 5,830,466 - AO356_25785 0.33 +1.3
Or see this region's nucleotide sequence