Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23590 and AO356_23595 are separated by 307 nucleotides AO356_23595 and AO356_23600 are separated by 60 nucleotides
AO356_23590: AO356_23590 - hypothetical protein, at 5,290,461 to 5,294,636
_23590
AO356_23595: AO356_23595 - short-chain dehydrogenase, at 5,294,944 to 5,295,708
_23595
AO356_23600: AO356_23600 - hypothetical protein, at 5,295,769 to 5,296,824
_23600
Position (kb) 5294
5295
5296 Strain fitness (log2 ratio) -1
0
1
2
3 at 5294.137 kb on + strand, within AO356_23590 at 5294.137 kb on + strand, within AO356_23590 at 5294.137 kb on + strand, within AO356_23590 at 5294.137 kb on + strand, within AO356_23590 at 5294.137 kb on + strand, within AO356_23590 at 5294.138 kb on - strand, within AO356_23590 at 5294.138 kb on - strand, within AO356_23590 at 5294.210 kb on - strand, within AO356_23590 at 5294.301 kb on - strand at 5294.301 kb on - strand at 5294.368 kb on + strand at 5294.584 kb on + strand at 5294.584 kb on + strand at 5294.584 kb on + strand at 5294.585 kb on - strand at 5294.630 kb on + strand at 5294.693 kb on + strand at 5294.693 kb on + strand at 5294.694 kb on - strand at 5294.694 kb on - strand at 5294.694 kb on - strand at 5294.757 kb on + strand at 5294.758 kb on - strand at 5295.066 kb on - strand, within AO356_23595 at 5295.374 kb on - strand, within AO356_23595 at 5295.726 kb on - strand at 5296.253 kb on + strand, within AO356_23600 at 5296.253 kb on + strand, within AO356_23600 at 5296.398 kb on - strand, within AO356_23600 at 5296.485 kb on - strand, within AO356_23600 at 5296.570 kb on + strand, within AO356_23600 at 5296.571 kb on - strand, within AO356_23600 at 5296.571 kb on - strand, within AO356_23600 at 5296.571 kb on - strand, within AO356_23600
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 5,294,137 + AO356_23590 0.88 +2.3 5,294,137 + AO356_23590 0.88 +0.6 5,294,137 + AO356_23590 0.88 +1.6 5,294,137 + AO356_23590 0.88 +1.7 5,294,137 + AO356_23590 0.88 -1.0 5,294,138 - AO356_23590 0.88 +0.4 5,294,138 - AO356_23590 0.88 +2.7 5,294,210 - AO356_23590 0.90 +1.1 5,294,301 - -0.0 5,294,301 - -0.4 5,294,368 + -0.4 5,294,584 + +1.3 5,294,584 + +2.8 5,294,584 + +1.8 5,294,585 - -0.0 5,294,630 + +1.0 5,294,693 + +1.0 5,294,693 + +1.4 5,294,694 - -0.4 5,294,694 - -0.6 5,294,694 - -1.3 5,294,757 + +2.2 5,294,758 - +1.2 5,295,066 - AO356_23595 0.16 -0.6 5,295,374 - AO356_23595 0.56 +2.0 5,295,726 - -1.0 5,296,253 + AO356_23600 0.46 -0.8 5,296,253 + AO356_23600 0.46 +0.4 5,296,398 - AO356_23600 0.60 -0.0 5,296,485 - AO356_23600 0.68 +0.4 5,296,570 + AO356_23600 0.76 +1.5 5,296,571 - AO356_23600 0.76 +1.7 5,296,571 - AO356_23600 0.76 +0.3 5,296,571 - AO356_23600 0.76 +0.6
Or see this region's nucleotide sequence