Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_20790 and AO356_20795 are separated by 393 nucleotides AO356_20795 and AO356_20800 are separated by 88 nucleotides AO356_20800 and AO356_20805 are separated by 251 nucleotides
AO356_20790: AO356_20790 - hypothetical protein, at 4,633,479 to 4,633,895
_20790
AO356_20795: AO356_20795 - hypothetical protein, at 4,634,289 to 4,634,492
_20795
AO356_20800: AO356_20800 - hypothetical protein, at 4,634,581 to 4,634,955
_20800
AO356_20805: AO356_20805 - HAD family hydrolase, at 4,635,207 to 4,635,902
_20805
Position (kb) 4634
4635 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4633.869 kb on + strand at 4633.869 kb on + strand at 4633.870 kb on - strand at 4633.870 kb on - strand at 4634.017 kb on + strand at 4634.017 kb on + strand at 4634.017 kb on + strand at 4634.017 kb on + strand at 4634.017 kb on + strand at 4634.018 kb on - strand at 4634.211 kb on + strand at 4634.212 kb on - strand at 4634.212 kb on - strand at 4634.249 kb on + strand at 4634.288 kb on + strand at 4634.288 kb on + strand at 4634.288 kb on + strand at 4634.288 kb on + strand at 4634.288 kb on + strand at 4634.288 kb on + strand at 4634.288 kb on + strand at 4634.288 kb on + strand at 4634.288 kb on + strand at 4634.289 kb on - strand at 4634.289 kb on - strand at 4634.289 kb on - strand at 4634.289 kb on - strand at 4634.289 kb on - strand at 4634.289 kb on - strand at 4634.289 kb on - strand at 4634.289 kb on - strand at 4634.289 kb on - strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.555 kb on + strand at 4634.556 kb on - strand at 4634.556 kb on - strand at 4634.556 kb on - strand at 4634.556 kb on - strand at 4634.556 kb on - strand at 4634.556 kb on - strand at 4634.559 kb on + strand at 4634.560 kb on - strand at 4634.560 kb on - strand at 4634.560 kb on - strand at 4634.560 kb on - strand at 4634.560 kb on - strand at 4634.893 kb on - strand, within AO356_20800 at 4634.972 kb on + strand at 4634.972 kb on + strand at 4634.972 kb on + strand at 4634.973 kb on - strand at 4634.973 kb on - strand at 4634.973 kb on - strand at 4635.090 kb on - strand at 4635.292 kb on - strand, within AO356_20805 at 4635.292 kb on - strand, within AO356_20805 at 4635.292 kb on - strand, within AO356_20805 at 4635.292 kb on - strand, within AO356_20805 at 4635.292 kb on - strand, within AO356_20805 at 4635.393 kb on + strand, within AO356_20805 at 4635.393 kb on + strand, within AO356_20805 at 4635.393 kb on + strand, within AO356_20805 at 4635.394 kb on - strand, within AO356_20805 at 4635.394 kb on - strand, within AO356_20805 at 4635.394 kb on - strand, within AO356_20805 at 4635.394 kb on - strand, within AO356_20805 at 4635.394 kb on - strand, within AO356_20805
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 4,633,869 + -1.4 4,633,869 + -0.5 4,633,870 - -0.8 4,633,870 - -1.8 4,634,017 + -0.8 4,634,017 + +1.2 4,634,017 + -1.8 4,634,017 + +0.2 4,634,017 + -0.2 4,634,018 - -0.8 4,634,211 + +2.5 4,634,212 - +1.2 4,634,212 - +1.2 4,634,249 + -0.8 4,634,288 + +1.2 4,634,288 + +0.8 4,634,288 + -0.8 4,634,288 + -2.8 4,634,288 + +0.4 4,634,288 + +0.2 4,634,288 + -0.8 4,634,288 + +0.2 4,634,288 + -3.4 4,634,289 - +0.2 4,634,289 - +0.2 4,634,289 - -0.5 4,634,289 - +0.2 4,634,289 - -1.8 4,634,289 - -0.8 4,634,289 - +0.2 4,634,289 - -1.6 4,634,289 - -0.8 4,634,555 + +0.8 4,634,555 + +1.2 4,634,555 + +0.2 4,634,555 + +0.2 4,634,555 + +0.2 4,634,555 + -0.8 4,634,555 + -0.2 4,634,555 + -1.8 4,634,555 + -2.4 4,634,555 + -1.8 4,634,555 + -0.8 4,634,555 + +1.8 4,634,555 + -1.8 4,634,556 - -0.8 4,634,556 - -0.8 4,634,556 - -0.2 4,634,556 - +0.2 4,634,556 - -0.5 4,634,556 - +0.2 4,634,559 + +0.8 4,634,560 - -2.4 4,634,560 - -1.8 4,634,560 - -0.8 4,634,560 - +0.2 4,634,560 - +0.8 4,634,893 - AO356_20800 0.83 -2.8 4,634,972 + +1.2 4,634,972 + -0.2 4,634,972 + -0.8 4,634,973 - +0.2 4,634,973 - -0.8 4,634,973 - -0.8 4,635,090 - +1.2 4,635,292 - AO356_20805 0.12 +1.5 4,635,292 - AO356_20805 0.12 -0.8 4,635,292 - AO356_20805 0.12 -2.4 4,635,292 - AO356_20805 0.12 -2.4 4,635,292 - AO356_20805 0.12 +0.2 4,635,393 + AO356_20805 0.27 +0.2 4,635,393 + AO356_20805 0.27 +2.6 4,635,393 + AO356_20805 0.27 -0.8 4,635,394 - AO356_20805 0.27 -0.8 4,635,394 - AO356_20805 0.27 +0.2 4,635,394 - AO356_20805 0.27 -1.8 4,635,394 - AO356_20805 0.27 +0.8 4,635,394 - AO356_20805 0.27 +0.0
Or see this region's nucleotide sequence