Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06425 and AO356_06430 are separated by 152 nucleotides AO356_06430 and AO356_06435 are separated by 215 nucleotides AO356_06435 and AO356_06440 are separated by 2 nucleotides
AO356_06425: AO356_06425 - MFS transporter, at 1,422,911 to 1,424,224
_06425
AO356_06430: AO356_06430 - Lon protease, at 1,424,377 to 1,426,791
_06430
AO356_06435: AO356_06435 - peptidase inhibitor I42, at 1,427,007 to 1,427,399
_06435
AO356_06440: AO356_06440 - hypothetical protein, at 1,427,402 to 1,428,037
_06440
Position (kb) 1424
1425
1426
1427 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1423.544 kb on + strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.697 kb on + strand, within AO356_06425 at 1423.697 kb on + strand, within AO356_06425 at 1423.697 kb on + strand, within AO356_06425 at 1423.697 kb on + strand, within AO356_06425 at 1423.697 kb on + strand, within AO356_06425 at 1423.698 kb on - strand, within AO356_06425 at 1423.698 kb on - strand, within AO356_06425 at 1423.711 kb on - strand, within AO356_06425 at 1423.724 kb on + strand, within AO356_06425 at 1423.724 kb on + strand, within AO356_06425 at 1423.725 kb on - strand, within AO356_06425 at 1423.732 kb on - strand, within AO356_06425 at 1423.745 kb on + strand, within AO356_06425 at 1423.786 kb on - strand, within AO356_06425 at 1424.027 kb on + strand, within AO356_06425 at 1424.027 kb on + strand, within AO356_06425 at 1424.028 kb on - strand, within AO356_06425 at 1424.029 kb on + strand, within AO356_06425 at 1424.126 kb on + strand at 1424.127 kb on - strand at 1424.127 kb on - strand at 1424.127 kb on - strand at 1424.127 kb on - strand at 1424.127 kb on - strand at 1424.296 kb on + strand at 1424.296 kb on + strand at 1424.296 kb on + strand at 1424.346 kb on + strand at 1424.346 kb on + strand at 1424.346 kb on + strand at 1424.346 kb on + strand at 1424.346 kb on + strand at 1424.346 kb on + strand at 1424.346 kb on + strand at 1424.346 kb on + strand at 1424.346 kb on + strand at 1424.347 kb on - strand at 1424.347 kb on - strand at 1424.347 kb on - strand at 1424.347 kb on - strand at 1424.347 kb on - strand at 1424.347 kb on - strand at 1424.347 kb on - strand at 1424.347 kb on - strand at 1424.347 kb on - strand at 1424.395 kb on - strand at 1424.395 kb on - strand at 1424.395 kb on - strand at 1424.406 kb on + strand at 1424.413 kb on + strand at 1424.494 kb on + strand at 1424.494 kb on + strand at 1424.494 kb on + strand at 1424.494 kb on + strand at 1424.494 kb on + strand at 1424.494 kb on + strand at 1424.494 kb on + strand at 1424.494 kb on + strand at 1424.494 kb on + strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.495 kb on - strand at 1424.681 kb on - strand, within AO356_06430 at 1424.815 kb on + strand, within AO356_06430 at 1424.857 kb on + strand, within AO356_06430 at 1424.911 kb on + strand, within AO356_06430 at 1424.912 kb on - strand, within AO356_06430 at 1424.932 kb on + strand, within AO356_06430 at 1424.933 kb on - strand, within AO356_06430 at 1424.933 kb on - strand, within AO356_06430 at 1425.039 kb on + strand, within AO356_06430 at 1425.039 kb on + strand, within AO356_06430 at 1425.039 kb on + strand, within AO356_06430 at 1425.039 kb on + strand, within AO356_06430 at 1425.040 kb on - strand, within AO356_06430 at 1425.040 kb on - strand, within AO356_06430 at 1425.040 kb on - strand, within AO356_06430 at 1425.040 kb on - strand, within AO356_06430 at 1425.177 kb on + strand, within AO356_06430 at 1425.177 kb on + strand, within AO356_06430 at 1425.177 kb on + strand, within AO356_06430 at 1425.177 kb on + strand, within AO356_06430 at 1425.177 kb on + strand, within AO356_06430 at 1425.177 kb on + strand, within AO356_06430 at 1425.178 kb on - strand, within AO356_06430 at 1425.178 kb on - strand, within AO356_06430 at 1425.178 kb on - strand, within AO356_06430 at 1425.178 kb on - strand, within AO356_06430 at 1425.178 kb on - strand, within AO356_06430 at 1425.178 kb on - strand, within AO356_06430 at 1425.341 kb on - strand, within AO356_06430 at 1425.358 kb on + strand, within AO356_06430 at 1425.358 kb on + strand, within AO356_06430 at 1425.358 kb on + strand, within AO356_06430 at 1425.359 kb on - strand, within AO356_06430 at 1425.394 kb on + strand, within AO356_06430 at 1425.395 kb on - strand, within AO356_06430 at 1425.395 kb on - strand, within AO356_06430 at 1425.395 kb on - strand, within AO356_06430 at 1425.505 kb on + strand, within AO356_06430 at 1425.506 kb on - strand, within AO356_06430 at 1425.610 kb on + strand, within AO356_06430 at 1425.610 kb on + strand, within AO356_06430 at 1425.611 kb on - strand, within AO356_06430 at 1425.670 kb on + strand, within AO356_06430 at 1425.670 kb on + strand, within AO356_06430 at 1425.670 kb on + strand, within AO356_06430 at 1425.670 kb on + strand, within AO356_06430 at 1425.670 kb on + strand, within AO356_06430 at 1425.671 kb on - strand, within AO356_06430 at 1425.671 kb on - strand, within AO356_06430 at 1425.671 kb on - strand, within AO356_06430 at 1425.671 kb on - strand, within AO356_06430 at 1425.772 kb on + strand, within AO356_06430 at 1425.773 kb on - strand, within AO356_06430 at 1425.773 kb on - strand, within AO356_06430 at 1425.773 kb on - strand, within AO356_06430 at 1425.773 kb on - strand, within AO356_06430 at 1425.844 kb on + strand, within AO356_06430 at 1425.845 kb on - strand, within AO356_06430 at 1425.845 kb on - strand, within AO356_06430 at 1425.958 kb on + strand, within AO356_06430 at 1425.959 kb on - strand, within AO356_06430 at 1425.959 kb on - strand, within AO356_06430 at 1425.959 kb on - strand, within AO356_06430 at 1426.405 kb on + strand, within AO356_06430 at 1426.405 kb on + strand, within AO356_06430 at 1426.405 kb on + strand, within AO356_06430 at 1426.406 kb on - strand, within AO356_06430 at 1426.406 kb on - strand, within AO356_06430 at 1426.478 kb on + strand, within AO356_06430 at 1426.479 kb on - strand, within AO356_06430 at 1426.724 kb on - strand at 1426.799 kb on + strand at 1426.800 kb on - strand at 1426.802 kb on - strand at 1426.810 kb on + strand at 1426.954 kb on - strand at 1426.954 kb on - strand at 1427.006 kb on + strand at 1427.006 kb on + strand at 1427.006 kb on + strand at 1427.006 kb on + strand at 1427.006 kb on + strand at 1427.006 kb on + strand at 1427.006 kb on + strand at 1427.006 kb on + strand at 1427.006 kb on + strand at 1427.006 kb on + strand at 1427.007 kb on - strand at 1427.206 kb on + strand, within AO356_06435 at 1427.206 kb on + strand, within AO356_06435 at 1427.206 kb on + strand, within AO356_06435 at 1427.206 kb on + strand, within AO356_06435 at 1427.206 kb on + strand, within AO356_06435 at 1427.206 kb on + strand, within AO356_06435 at 1427.207 kb on - strand, within AO356_06435 at 1427.207 kb on - strand, within AO356_06435 at 1427.233 kb on - strand, within AO356_06435 at 1427.331 kb on + strand, within AO356_06435 at 1427.331 kb on + strand, within AO356_06435 at 1427.331 kb on + strand, within AO356_06435 at 1427.331 kb on + strand, within AO356_06435 at 1427.331 kb on + strand, within AO356_06435 at 1427.331 kb on + strand, within AO356_06435 at 1427.332 kb on - strand, within AO356_06435 at 1427.332 kb on - strand, within AO356_06435 at 1427.332 kb on - strand, within AO356_06435 at 1427.441 kb on + strand at 1427.441 kb on + strand at 1427.441 kb on + strand at 1427.441 kb on + strand at 1427.442 kb on - strand at 1427.442 kb on - strand at 1427.442 kb on - strand at 1427.442 kb on - strand at 1427.442 kb on - strand at 1427.442 kb on - strand at 1427.442 kb on - strand at 1427.447 kb on + strand at 1427.664 kb on - strand, within AO356_06440 at 1427.664 kb on - strand, within AO356_06440 at 1427.675 kb on + strand, within AO356_06440 at 1427.676 kb on - strand, within AO356_06440
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 1,423,544 + AO356_06425 0.48 +0.3 1,423,545 - AO356_06425 0.48 -0.5 1,423,545 - AO356_06425 0.48 +2.3 1,423,545 - AO356_06425 0.48 +1.3 1,423,545 - AO356_06425 0.48 +1.3 1,423,545 - AO356_06425 0.48 +1.5 1,423,545 - AO356_06425 0.48 +0.5 1,423,697 + AO356_06425 0.60 +0.1 1,423,697 + AO356_06425 0.60 -0.4 1,423,697 + AO356_06425 0.60 +0.2 1,423,697 + AO356_06425 0.60 -0.9 1,423,697 + AO356_06425 0.60 +1.1 1,423,698 - AO356_06425 0.60 +1.1 1,423,698 - AO356_06425 0.60 +1.5 1,423,711 - AO356_06425 0.61 -0.5 1,423,724 + AO356_06425 0.62 +0.9 1,423,724 + AO356_06425 0.62 +0.5 1,423,725 - AO356_06425 0.62 +2.1 1,423,732 - AO356_06425 0.62 -1.1 1,423,745 + AO356_06425 0.63 +1.4 1,423,786 - AO356_06425 0.67 +0.8 1,424,027 + AO356_06425 0.85 +0.1 1,424,027 + AO356_06425 0.85 -0.5 1,424,028 - AO356_06425 0.85 +1.9 1,424,029 + AO356_06425 0.85 -0.8 1,424,126 + -0.1 1,424,127 - +1.5 1,424,127 - -1.5 1,424,127 - -0.5 1,424,127 - +0.5 1,424,127 - +1.7 1,424,296 + +2.1 1,424,296 + -0.5 1,424,296 + +0.3 1,424,346 + -0.5 1,424,346 + +0.5 1,424,346 + +1.3 1,424,346 + +1.9 1,424,346 + +0.1 1,424,346 + -0.5 1,424,346 + +1.3 1,424,346 + +0.9 1,424,346 + -0.5 1,424,347 - +1.1 1,424,347 - +0.5 1,424,347 - +0.5 1,424,347 - +0.5 1,424,347 - +1.3 1,424,347 - +1.1 1,424,347 - -0.5 1,424,347 - +2.9 1,424,347 - -0.5 1,424,395 - -0.5 1,424,395 - +2.1 1,424,395 - +1.3 1,424,406 + +1.3 1,424,413 + +0.9 1,424,494 + +1.3 1,424,494 + -1.1 1,424,494 + +2.2 1,424,494 + +0.5 1,424,494 + +1.5 1,424,494 + +0.8 1,424,494 + +3.1 1,424,494 + +0.5 1,424,494 + -0.1 1,424,495 - -1.7 1,424,495 - -0.5 1,424,495 - -0.7 1,424,495 - +1.1 1,424,495 - +2.3 1,424,495 - -0.5 1,424,495 - +1.5 1,424,495 - -1.1 1,424,495 - +1.9 1,424,495 - -0.5 1,424,495 - -0.1 1,424,495 - +1.1 1,424,495 - +0.5 1,424,495 - +0.4 1,424,681 - AO356_06430 0.13 -2.8 1,424,815 + AO356_06430 0.18 +0.1 1,424,857 + AO356_06430 0.20 +0.1 1,424,911 + AO356_06430 0.22 +0.3 1,424,912 - AO356_06430 0.22 +1.1 1,424,932 + AO356_06430 0.23 +0.8 1,424,933 - AO356_06430 0.23 -1.1 1,424,933 - AO356_06430 0.23 +0.9 1,425,039 + AO356_06430 0.27 +0.5 1,425,039 + AO356_06430 0.27 +1.0 1,425,039 + AO356_06430 0.27 +0.5 1,425,039 + AO356_06430 0.27 +0.5 1,425,040 - AO356_06430 0.27 +1.1 1,425,040 - AO356_06430 0.27 -0.5 1,425,040 - AO356_06430 0.27 +0.4 1,425,040 - AO356_06430 0.27 +1.3 1,425,177 + AO356_06430 0.33 +0.9 1,425,177 + AO356_06430 0.33 +1.3 1,425,177 + AO356_06430 0.33 +1.1 1,425,177 + AO356_06430 0.33 +1.1 1,425,177 + AO356_06430 0.33 -1.5 1,425,177 + AO356_06430 0.33 -1.5 1,425,178 - AO356_06430 0.33 -1.5 1,425,178 - AO356_06430 0.33 +1.9 1,425,178 - AO356_06430 0.33 +1.3 1,425,178 - AO356_06430 0.33 +1.5 1,425,178 - AO356_06430 0.33 +0.2 1,425,178 - AO356_06430 0.33 -0.5 1,425,341 - AO356_06430 0.40 -0.2 1,425,358 + AO356_06430 0.41 -0.1 1,425,358 + AO356_06430 0.41 -0.5 1,425,358 + AO356_06430 0.41 +2.5 1,425,359 - AO356_06430 0.41 +0.9 1,425,394 + AO356_06430 0.42 -0.7 1,425,395 - AO356_06430 0.42 -2.1 1,425,395 - AO356_06430 0.42 +0.5 1,425,395 - AO356_06430 0.42 +1.1 1,425,505 + AO356_06430 0.47 +1.9 1,425,506 - AO356_06430 0.47 +0.5 1,425,610 + AO356_06430 0.51 -0.5 1,425,610 + AO356_06430 0.51 -0.3 1,425,611 - AO356_06430 0.51 +0.5 1,425,670 + AO356_06430 0.54 -0.5 1,425,670 + AO356_06430 0.54 -0.7 1,425,670 + AO356_06430 0.54 +0.9 1,425,670 + AO356_06430 0.54 +1.5 1,425,670 + AO356_06430 0.54 -0.7 1,425,671 - AO356_06430 0.54 +0.5 1,425,671 - AO356_06430 0.54 -0.5 1,425,671 - AO356_06430 0.54 -1.5 1,425,671 - AO356_06430 0.54 +0.3 1,425,772 + AO356_06430 0.58 -0.5 1,425,773 - AO356_06430 0.58 -1.2 1,425,773 - AO356_06430 0.58 -0.5 1,425,773 - AO356_06430 0.58 -0.5 1,425,773 - AO356_06430 0.58 -0.5 1,425,844 + AO356_06430 0.61 +1.5 1,425,845 - AO356_06430 0.61 +0.1 1,425,845 - AO356_06430 0.61 +0.3 1,425,958 + AO356_06430 0.65 +0.5 1,425,959 - AO356_06430 0.66 -1.1 1,425,959 - AO356_06430 0.66 +0.5 1,425,959 - AO356_06430 0.66 +1.5 1,426,405 + AO356_06430 0.84 +1.7 1,426,405 + AO356_06430 0.84 +3.2 1,426,405 + AO356_06430 0.84 +0.3 1,426,406 - AO356_06430 0.84 +0.7 1,426,406 - AO356_06430 0.84 -0.5 1,426,478 + AO356_06430 0.87 +2.5 1,426,479 - AO356_06430 0.87 +0.9 1,426,724 - +0.1 1,426,799 + +1.1 1,426,800 - +0.5 1,426,802 - -0.3 1,426,810 + +0.5 1,426,954 - -1.2 1,426,954 - +0.3 1,427,006 + +0.5 1,427,006 + +1.1 1,427,006 + +1.1 1,427,006 + +0.3 1,427,006 + +0.5 1,427,006 + -0.2 1,427,006 + +1.1 1,427,006 + -0.5 1,427,006 + -0.5 1,427,006 + +0.5 1,427,007 - -0.5 1,427,206 + AO356_06435 0.51 -0.5 1,427,206 + AO356_06435 0.51 -0.5 1,427,206 + AO356_06435 0.51 -1.1 1,427,206 + AO356_06435 0.51 +0.9 1,427,206 + AO356_06435 0.51 +1.1 1,427,206 + AO356_06435 0.51 +1.5 1,427,207 - AO356_06435 0.51 +1.5 1,427,207 - AO356_06435 0.51 +1.1 1,427,233 - AO356_06435 0.58 +2.5 1,427,331 + AO356_06435 0.82 +1.1 1,427,331 + AO356_06435 0.82 +1.9 1,427,331 + AO356_06435 0.82 +0.7 1,427,331 + AO356_06435 0.82 +1.1 1,427,331 + AO356_06435 0.82 -0.5 1,427,331 + AO356_06435 0.82 +0.1 1,427,332 - AO356_06435 0.83 +1.5 1,427,332 - AO356_06435 0.83 -0.1 1,427,332 - AO356_06435 0.83 -0.3 1,427,441 + +1.9 1,427,441 + +0.9 1,427,441 + +0.5 1,427,441 + -0.5 1,427,442 - +1.1 1,427,442 - -2.3 1,427,442 - -1.5 1,427,442 - -1.7 1,427,442 - +0.1 1,427,442 - +0.5 1,427,442 - +0.0 1,427,447 + +1.5 1,427,664 - AO356_06440 0.41 +0.2 1,427,664 - AO356_06440 0.41 -1.1 1,427,675 + AO356_06440 0.43 -0.5 1,427,676 - AO356_06440 0.43 -0.7
Or see this region's nucleotide sequence