Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06415 and AO356_06420 are separated by 12 nucleotides AO356_06420 and AO356_06425 are separated by 290 nucleotides
AO356_06415: AO356_06415 - cytochrome C assembly protein, at 1,420,554 to 1,421,366
_06415
AO356_06420: AO356_06420 - transporter, at 1,421,379 to 1,422,620
_06420
AO356_06425: AO356_06425 - MFS transporter, at 1,422,911 to 1,424,224
_06425
Position (kb) 1421
1422
1423 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 1420.456 kb on - strand at 1420.458 kb on - strand at 1420.477 kb on + strand at 1420.477 kb on + strand at 1420.478 kb on - strand at 1420.478 kb on - strand at 1420.478 kb on - strand at 1420.478 kb on - strand at 1420.512 kb on + strand at 1420.513 kb on - strand at 1420.513 kb on - strand at 1420.513 kb on - strand at 1420.513 kb on - strand at 1420.553 kb on + strand at 1420.553 kb on + strand at 1420.553 kb on + strand at 1420.554 kb on - strand at 1420.554 kb on - strand at 1420.554 kb on - strand at 1420.554 kb on - strand at 1420.554 kb on - strand at 1420.606 kb on - strand at 1420.623 kb on + strand at 1420.623 kb on + strand at 1420.623 kb on + strand at 1420.719 kb on + strand, within AO356_06415 at 1420.719 kb on + strand, within AO356_06415 at 1420.720 kb on - strand, within AO356_06415 at 1420.722 kb on - strand, within AO356_06415 at 1420.722 kb on - strand, within AO356_06415 at 1421.014 kb on + strand, within AO356_06415 at 1421.188 kb on + strand, within AO356_06415 at 1421.188 kb on + strand, within AO356_06415 at 1421.188 kb on + strand, within AO356_06415 at 1421.189 kb on - strand, within AO356_06415 at 1421.189 kb on - strand, within AO356_06415 at 1421.323 kb on - strand at 1421.349 kb on + strand at 1421.349 kb on + strand at 1421.349 kb on + strand at 1421.349 kb on + strand at 1421.349 kb on + strand at 1421.350 kb on - strand at 1421.350 kb on - strand at 1421.350 kb on - strand at 1421.350 kb on - strand at 1421.360 kb on + strand at 1421.361 kb on - strand at 1421.361 kb on - strand at 1421.384 kb on + strand at 1421.384 kb on + strand at 1421.384 kb on + strand at 1421.384 kb on + strand at 1421.384 kb on + strand at 1421.384 kb on + strand at 1421.385 kb on - strand at 1421.385 kb on - strand at 1421.385 kb on - strand at 1421.562 kb on - strand, within AO356_06420 at 1421.613 kb on - strand, within AO356_06420 at 1421.613 kb on - strand, within AO356_06420 at 1421.683 kb on - strand, within AO356_06420 at 1421.769 kb on + strand, within AO356_06420 at 1421.770 kb on - strand, within AO356_06420 at 1421.770 kb on - strand, within AO356_06420 at 1422.180 kb on + strand, within AO356_06420 at 1422.180 kb on + strand, within AO356_06420 at 1422.180 kb on + strand, within AO356_06420 at 1422.180 kb on + strand, within AO356_06420 at 1422.181 kb on - strand, within AO356_06420 at 1422.181 kb on - strand, within AO356_06420 at 1422.181 kb on - strand, within AO356_06420 at 1422.267 kb on + strand, within AO356_06420 at 1422.268 kb on - strand, within AO356_06420 at 1422.268 kb on - strand, within AO356_06420 at 1422.277 kb on + strand, within AO356_06420 at 1422.277 kb on + strand, within AO356_06420 at 1422.278 kb on - strand, within AO356_06420 at 1422.593 kb on + strand at 1422.594 kb on - strand at 1422.594 kb on - strand at 1422.594 kb on - strand at 1422.594 kb on - strand at 1422.594 kb on - strand at 1422.618 kb on + strand at 1422.618 kb on + strand at 1422.618 kb on + strand at 1422.619 kb on - strand at 1422.709 kb on + strand at 1422.709 kb on + strand at 1422.709 kb on + strand at 1422.709 kb on + strand at 1422.709 kb on + strand at 1422.709 kb on + strand at 1422.709 kb on + strand at 1422.710 kb on - strand at 1422.710 kb on - strand at 1422.710 kb on - strand at 1422.710 kb on - strand at 1422.710 kb on - strand at 1422.710 kb on - strand at 1422.710 kb on - strand at 1422.710 kb on - strand at 1422.711 kb on + strand at 1422.711 kb on + strand at 1422.712 kb on - strand at 1422.712 kb on - strand at 1422.751 kb on + strand at 1422.867 kb on + strand at 1422.867 kb on + strand at 1422.867 kb on + strand at 1422.868 kb on - strand at 1422.868 kb on - strand at 1422.870 kb on + strand at 1422.870 kb on + strand at 1422.870 kb on + strand at 1422.870 kb on + strand at 1422.870 kb on + strand at 1422.871 kb on - strand at 1422.871 kb on - strand at 1422.871 kb on - strand at 1422.871 kb on - strand at 1423.010 kb on + strand at 1423.010 kb on + strand at 1423.011 kb on - strand at 1423.011 kb on - strand at 1423.019 kb on + strand at 1423.019 kb on + strand at 1423.019 kb on + strand at 1423.019 kb on + strand at 1423.019 kb on + strand at 1423.019 kb on + strand at 1423.019 kb on + strand at 1423.019 kb on + strand at 1423.019 kb on + strand at 1423.019 kb on + strand at 1423.020 kb on - strand at 1423.020 kb on - strand at 1423.020 kb on - strand at 1423.020 kb on - strand at 1423.020 kb on - strand at 1423.020 kb on - strand at 1423.020 kb on - strand at 1423.020 kb on - strand at 1423.020 kb on - strand at 1423.020 kb on - strand at 1423.025 kb on + strand at 1423.025 kb on + strand at 1423.025 kb on + strand at 1423.026 kb on - strand at 1423.544 kb on + strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425 at 1423.545 kb on - strand, within AO356_06425
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 1,420,456 - -0.1 1,420,458 - -0.5 1,420,477 + +0.2 1,420,477 + -0.5 1,420,478 - +0.5 1,420,478 - +0.8 1,420,478 - -2.1 1,420,478 - +0.6 1,420,512 + +0.5 1,420,513 - +2.1 1,420,513 - +1.5 1,420,513 - +1.5 1,420,513 - -0.5 1,420,553 + +0.5 1,420,553 + +2.7 1,420,553 + +2.5 1,420,554 - +1.1 1,420,554 - +4.5 1,420,554 - -0.9 1,420,554 - +0.5 1,420,554 - +0.3 1,420,606 - +0.1 1,420,623 + -2.1 1,420,623 + +0.5 1,420,623 + -0.2 1,420,719 + AO356_06415 0.20 +1.5 1,420,719 + AO356_06415 0.20 -1.5 1,420,720 - AO356_06415 0.20 +1.6 1,420,722 - AO356_06415 0.21 -0.5 1,420,722 - AO356_06415 0.21 +0.1 1,421,014 + AO356_06415 0.57 +1.1 1,421,188 + AO356_06415 0.78 +1.5 1,421,188 + AO356_06415 0.78 +1.1 1,421,188 + AO356_06415 0.78 -0.5 1,421,189 - AO356_06415 0.78 -0.5 1,421,189 - AO356_06415 0.78 +2.1 1,421,323 - +0.5 1,421,349 + -2.1 1,421,349 + -0.5 1,421,349 + +0.5 1,421,349 + +2.1 1,421,349 + +1.1 1,421,350 - -0.8 1,421,350 - +1.1 1,421,350 - +0.5 1,421,350 - +0.5 1,421,360 + +0.5 1,421,361 - +2.3 1,421,361 - +2.3 1,421,384 + -0.5 1,421,384 + -0.1 1,421,384 + +1.3 1,421,384 + +2.1 1,421,384 + -0.5 1,421,384 + +1.1 1,421,385 - -1.1 1,421,385 - +2.9 1,421,385 - +0.5 1,421,562 - AO356_06420 0.15 +0.9 1,421,613 - AO356_06420 0.19 +0.3 1,421,613 - AO356_06420 0.19 +0.9 1,421,683 - AO356_06420 0.24 -1.5 1,421,769 + AO356_06420 0.31 -1.5 1,421,770 - AO356_06420 0.31 +1.3 1,421,770 - AO356_06420 0.31 +0.7 1,422,180 + AO356_06420 0.64 -1.5 1,422,180 + AO356_06420 0.64 +0.2 1,422,180 + AO356_06420 0.64 +2.1 1,422,180 + AO356_06420 0.64 -0.5 1,422,181 - AO356_06420 0.65 +0.4 1,422,181 - AO356_06420 0.65 +0.5 1,422,181 - AO356_06420 0.65 +0.5 1,422,267 + AO356_06420 0.71 -0.2 1,422,268 - AO356_06420 0.72 +2.0 1,422,268 - AO356_06420 0.72 +1.3 1,422,277 + AO356_06420 0.72 +1.1 1,422,277 + AO356_06420 0.72 +0.5 1,422,278 - AO356_06420 0.72 +0.1 1,422,593 + +0.7 1,422,594 - +0.1 1,422,594 - +1.1 1,422,594 - -0.2 1,422,594 - -0.3 1,422,594 - +0.3 1,422,618 + +0.5 1,422,618 + +0.1 1,422,618 + -1.5 1,422,619 - +0.3 1,422,709 + -0.5 1,422,709 + +0.1 1,422,709 + +0.5 1,422,709 + +1.1 1,422,709 + +0.9 1,422,709 + +0.5 1,422,709 + +0.5 1,422,710 - -1.1 1,422,710 - -0.5 1,422,710 - +1.7 1,422,710 - -0.5 1,422,710 - -0.5 1,422,710 - -0.0 1,422,710 - -0.5 1,422,710 - +1.1 1,422,711 + +1.5 1,422,711 + +2.5 1,422,712 - +1.3 1,422,712 - -2.8 1,422,751 + +0.5 1,422,867 + +0.5 1,422,867 + +0.1 1,422,867 + +0.1 1,422,868 - +0.5 1,422,868 - +2.0 1,422,870 + +1.9 1,422,870 + -0.1 1,422,870 + +1.1 1,422,870 + -0.5 1,422,870 + +1.5 1,422,871 - -0.5 1,422,871 - +2.6 1,422,871 - +1.5 1,422,871 - -0.1 1,423,010 + -0.5 1,423,010 + +2.3 1,423,011 - +1.3 1,423,011 - -1.0 1,423,019 + +0.5 1,423,019 + +0.5 1,423,019 + +1.3 1,423,019 + +0.9 1,423,019 + +0.5 1,423,019 + +1.7 1,423,019 + +0.1 1,423,019 + +1.1 1,423,019 + -0.5 1,423,019 + +1.5 1,423,020 - +0.5 1,423,020 - -0.1 1,423,020 - +0.2 1,423,020 - -0.5 1,423,020 - +0.3 1,423,020 - -0.2 1,423,020 - +0.5 1,423,020 - -1.5 1,423,020 - +1.5 1,423,020 - +1.5 1,423,025 + +1.1 1,423,025 + +1.9 1,423,025 + +1.3 1,423,026 - -2.5 1,423,544 + AO356_06425 0.48 +0.3 1,423,545 - AO356_06425 0.48 -0.5 1,423,545 - AO356_06425 0.48 +2.3 1,423,545 - AO356_06425 0.48 +1.3 1,423,545 - AO356_06425 0.48 +1.3 1,423,545 - AO356_06425 0.48 +1.5 1,423,545 - AO356_06425 0.48 +0.5
Or see this region's nucleotide sequence