Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05085 and AO356_05090 are separated by 173 nucleotides AO356_05090 and AO356_05095 are separated by 196 nucleotides AO356_05095 and AO356_05100 are separated by 206 nucleotides
AO356_05085: AO356_05085 - ribonuclease BN, at 1,142,392 to 1,143,342
_05085
AO356_05090: AO356_05090 - hypothetical protein, at 1,143,516 to 1,143,707
_05090
AO356_05095: AO356_05095 - hypothetical protein, at 1,143,904 to 1,144,281
_05095
AO356_05100: AO356_05100 - long-chain fatty acid--CoA ligase, at 1,144,488 to 1,146,179
_05100
Position (kb) 1143
1144
1145 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1142.924 kb on + strand, within AO356_05085 at 1142.925 kb on - strand, within AO356_05085 at 1142.979 kb on - strand, within AO356_05085 at 1143.254 kb on + strand at 1143.254 kb on + strand at 1143.255 kb on - strand at 1143.255 kb on - strand at 1143.292 kb on - strand at 1143.316 kb on + strand at 1143.316 kb on + strand at 1143.412 kb on + strand at 1143.504 kb on - strand at 1143.504 kb on - strand at 1143.504 kb on - strand at 1143.506 kb on + strand at 1143.506 kb on + strand at 1143.507 kb on - strand at 1143.507 kb on - strand at 1143.517 kb on + strand at 1143.517 kb on + strand at 1143.518 kb on - strand at 1143.614 kb on + strand, within AO356_05090 at 1143.614 kb on + strand, within AO356_05090 at 1143.614 kb on + strand, within AO356_05090 at 1143.615 kb on - strand, within AO356_05090 at 1143.615 kb on - strand, within AO356_05090 at 1143.615 kb on - strand, within AO356_05090 at 1143.690 kb on - strand at 1143.690 kb on - strand at 1143.690 kb on - strand at 1143.744 kb on + strand at 1143.744 kb on + strand at 1143.744 kb on + strand at 1143.744 kb on + strand at 1143.744 kb on + strand at 1143.744 kb on + strand at 1143.745 kb on - strand at 1143.745 kb on - strand at 1143.745 kb on - strand at 1143.748 kb on + strand at 1143.748 kb on + strand at 1143.748 kb on + strand at 1143.748 kb on + strand at 1143.748 kb on + strand at 1143.749 kb on - strand at 1143.749 kb on - strand at 1143.749 kb on - strand at 1143.749 kb on - strand at 1143.749 kb on - strand at 1143.749 kb on - strand at 1143.749 kb on - strand at 1143.827 kb on + strand at 1143.827 kb on + strand at 1143.827 kb on + strand at 1143.827 kb on + strand at 1143.828 kb on - strand at 1143.828 kb on - strand at 1143.862 kb on + strand at 1143.862 kb on + strand at 1143.862 kb on + strand at 1143.862 kb on + strand at 1143.863 kb on - strand at 1143.863 kb on - strand at 1143.903 kb on + strand at 1143.903 kb on + strand at 1143.903 kb on + strand at 1143.916 kb on - strand at 1143.916 kb on - strand at 1144.057 kb on + strand, within AO356_05095 at 1144.057 kb on + strand, within AO356_05095 at 1144.057 kb on + strand, within AO356_05095 at 1144.058 kb on - strand, within AO356_05095 at 1144.222 kb on + strand, within AO356_05095 at 1144.223 kb on - strand, within AO356_05095 at 1144.223 kb on - strand, within AO356_05095 at 1144.280 kb on - strand at 1144.489 kb on + strand at 1144.490 kb on - strand at 1144.837 kb on + strand, within AO356_05100 at 1144.837 kb on + strand, within AO356_05100 at 1144.838 kb on - strand, within AO356_05100 at 1144.838 kb on - strand, within AO356_05100 at 1144.838 kb on - strand, within AO356_05100 at 1145.042 kb on + strand, within AO356_05100 at 1145.042 kb on + strand, within AO356_05100 at 1145.107 kb on + strand, within AO356_05100 at 1145.256 kb on - strand, within AO356_05100 at 1145.256 kb on - strand, within AO356_05100 at 1145.256 kb on - strand, within AO356_05100
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3 remove 1,142,924 + AO356_05085 0.56 +0.4 1,142,925 - AO356_05085 0.56 -0.6 1,142,979 - AO356_05085 0.62 +1.4 1,143,254 + +0.6 1,143,254 + +1.0 1,143,255 - +0.4 1,143,255 - -0.6 1,143,292 - +0.4 1,143,316 + +0.1 1,143,316 + +0.8 1,143,412 + -0.6 1,143,504 - +1.9 1,143,504 - +1.0 1,143,504 - +2.6 1,143,506 + -0.6 1,143,506 + -1.2 1,143,507 - -1.4 1,143,507 - -0.0 1,143,517 + +2.0 1,143,517 + +0.9 1,143,518 - +0.4 1,143,614 + AO356_05090 0.51 -0.6 1,143,614 + AO356_05090 0.51 -2.2 1,143,614 + AO356_05090 0.51 -0.6 1,143,615 - AO356_05090 0.52 -0.6 1,143,615 - AO356_05090 0.52 +1.1 1,143,615 - AO356_05090 0.52 +1.7 1,143,690 - -0.9 1,143,690 - +0.4 1,143,690 - +0.4 1,143,744 + +2.7 1,143,744 + +1.0 1,143,744 + +1.0 1,143,744 + +0.7 1,143,744 + +0.7 1,143,744 + +0.6 1,143,745 - +0.1 1,143,745 - +0.4 1,143,745 - -0.8 1,143,748 + -0.9 1,143,748 + +1.1 1,143,748 + -2.5 1,143,748 + -0.3 1,143,748 + +1.0 1,143,749 - +0.3 1,143,749 - -0.1 1,143,749 - +1.4 1,143,749 - -1.6 1,143,749 - -0.2 1,143,749 - -0.6 1,143,749 - -0.6 1,143,827 + +1.4 1,143,827 + +1.1 1,143,827 + +0.2 1,143,827 + -0.6 1,143,828 - +1.7 1,143,828 - +1.0 1,143,862 + -0.8 1,143,862 + -0.2 1,143,862 + +0.9 1,143,862 + -0.6 1,143,863 - -0.3 1,143,863 - +0.4 1,143,903 + +1.0 1,143,903 + +0.5 1,143,903 + -0.1 1,143,916 - +0.5 1,143,916 - -0.6 1,144,057 + AO356_05095 0.40 -0.3 1,144,057 + AO356_05095 0.40 -0.1 1,144,057 + AO356_05095 0.40 -0.7 1,144,058 - AO356_05095 0.41 +0.1 1,144,222 + AO356_05095 0.84 +0.1 1,144,223 - AO356_05095 0.84 -1.2 1,144,223 - AO356_05095 0.84 +1.0 1,144,280 - -0.8 1,144,489 + -1.6 1,144,490 - -1.0 1,144,837 + AO356_05100 0.21 -0.6 1,144,837 + AO356_05100 0.21 -0.0 1,144,838 - AO356_05100 0.21 +0.4 1,144,838 - AO356_05100 0.21 -0.6 1,144,838 - AO356_05100 0.21 -0.1 1,145,042 + AO356_05100 0.33 +2.4 1,145,042 + AO356_05100 0.33 -0.6 1,145,107 + AO356_05100 0.37 +1.4 1,145,256 - AO356_05100 0.45 +1.2 1,145,256 - AO356_05100 0.45 -0.0 1,145,256 - AO356_05100 0.45 -0.3
Or see this region's nucleotide sequence