Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_03215

Experiment: KB-half, Pseudo11 supernatant, 100 uM FeCl3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_03210 and AO356_03215 are separated by 123 nucleotidesAO356_03215 and AO356_03220 are separated by 252 nucleotidesAO356_03220 and AO356_03225 are separated by 56 nucleotides AO356_03210: AO356_03210 - hypothetical protein, at 713,917 to 714,168 _03210 AO356_03215: AO356_03215 - hypothetical protein, at 714,292 to 715,263 _03215 AO356_03220: AO356_03220 - hypothetical protein, at 715,516 to 715,809 _03220 AO356_03225: AO356_03225 - esterase, at 715,866 to 716,471 _03225 Position (kb) 714 715 716Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 713.314 kb on + strandat 713.314 kb on + strandat 713.314 kb on + strandat 713.348 kb on + strandat 713.348 kb on + strandat 713.349 kb on - strandat 713.349 kb on - strandat 713.418 kb on + strandat 713.418 kb on + strandat 713.419 kb on - strandat 713.419 kb on - strandat 713.419 kb on - strandat 713.419 kb on - strandat 713.419 kb on - strandat 713.421 kb on + strandat 713.421 kb on + strandat 713.422 kb on - strandat 713.422 kb on - strandat 713.422 kb on - strandat 713.530 kb on + strandat 713.530 kb on + strandat 713.531 kb on - strandat 713.531 kb on - strandat 713.573 kb on + strandat 713.577 kb on + strandat 713.578 kb on - strandat 713.592 kb on + strandat 713.593 kb on - strandat 713.598 kb on + strandat 713.598 kb on + strandat 713.651 kb on + strandat 713.742 kb on - strandat 713.743 kb on + strandat 713.743 kb on + strandat 713.743 kb on + strandat 713.744 kb on - strandat 713.744 kb on - strandat 713.744 kb on - strandat 713.826 kb on - strandat 713.829 kb on + strandat 713.830 kb on - strandat 713.832 kb on + strandat 713.832 kb on + strandat 713.833 kb on - strandat 713.838 kb on + strandat 713.848 kb on + strandat 713.848 kb on + strandat 713.848 kb on + strandat 713.849 kb on - strandat 713.849 kb on - strandat 713.849 kb on - strandat 713.849 kb on - strandat 713.849 kb on - strandat 713.849 kb on - strandat 713.889 kb on + strandat 713.889 kb on + strandat 713.889 kb on + strandat 713.890 kb on - strandat 713.892 kb on + strandat 713.892 kb on + strandat 713.892 kb on + strandat 713.892 kb on + strandat 713.892 kb on + strandat 713.892 kb on + strandat 713.892 kb on + strandat 713.892 kb on + strandat 713.892 kb on + strandat 713.892 kb on + strandat 713.893 kb on - strandat 713.893 kb on - strandat 713.893 kb on - strandat 713.893 kb on - strandat 714.061 kb on + strand, within AO356_03210at 714.066 kb on + strand, within AO356_03210at 714.166 kb on + strandat 714.166 kb on + strandat 714.166 kb on + strandat 714.166 kb on + strandat 714.166 kb on + strandat 714.167 kb on - strandat 714.167 kb on - strandat 714.167 kb on - strandat 714.169 kb on + strandat 714.170 kb on - strandat 714.170 kb on - strandat 714.293 kb on + strandat 714.294 kb on - strandat 714.340 kb on - strandat 714.340 kb on - strandat 714.510 kb on + strand, within AO356_03215at 714.511 kb on - strand, within AO356_03215at 714.525 kb on - strand, within AO356_03215at 714.554 kb on + strand, within AO356_03215at 714.555 kb on - strand, within AO356_03215at 714.613 kb on + strand, within AO356_03215at 714.613 kb on + strand, within AO356_03215at 714.613 kb on + strand, within AO356_03215at 714.613 kb on + strand, within AO356_03215at 714.613 kb on + strand, within AO356_03215at 714.614 kb on - strand, within AO356_03215at 714.614 kb on - strand, within AO356_03215at 714.905 kb on + strand, within AO356_03215at 714.905 kb on + strand, within AO356_03215at 714.905 kb on + strand, within AO356_03215at 714.905 kb on + strand, within AO356_03215at 714.905 kb on + strand, within AO356_03215at 714.906 kb on - strand, within AO356_03215at 714.906 kb on - strand, within AO356_03215at 714.906 kb on - strand, within AO356_03215at 714.906 kb on - strand, within AO356_03215at 714.906 kb on - strand, within AO356_03215at 714.906 kb on - strand, within AO356_03215at 714.932 kb on + strand, within AO356_03215at 714.932 kb on + strand, within AO356_03215at 714.932 kb on + strand, within AO356_03215at 714.932 kb on + strand, within AO356_03215at 714.932 kb on + strand, within AO356_03215at 714.933 kb on - strand, within AO356_03215at 714.933 kb on - strand, within AO356_03215at 714.933 kb on - strand, within AO356_03215at 714.935 kb on + strand, within AO356_03215at 714.935 kb on + strand, within AO356_03215at 714.936 kb on - strand, within AO356_03215at 715.077 kb on - strand, within AO356_03215at 715.077 kb on - strand, within AO356_03215at 715.088 kb on + strand, within AO356_03215at 715.088 kb on + strand, within AO356_03215at 715.088 kb on + strand, within AO356_03215at 715.088 kb on + strand, within AO356_03215at 715.088 kb on + strand, within AO356_03215at 715.088 kb on + strand, within AO356_03215at 715.088 kb on + strand, within AO356_03215at 715.088 kb on + strand, within AO356_03215at 715.088 kb on + strand, within AO356_03215at 715.088 kb on + strand, within AO356_03215at 715.089 kb on - strand, within AO356_03215at 715.089 kb on - strand, within AO356_03215at 715.089 kb on - strand, within AO356_03215at 715.089 kb on - strand, within AO356_03215at 715.089 kb on - strand, within AO356_03215at 715.089 kb on - strand, within AO356_03215at 715.121 kb on + strand, within AO356_03215at 715.121 kb on + strand, within AO356_03215at 715.122 kb on - strand, within AO356_03215at 715.296 kb on - strandat 715.312 kb on + strandat 715.312 kb on + strandat 715.312 kb on + strandat 715.313 kb on - strandat 715.313 kb on - strandat 715.313 kb on - strandat 715.328 kb on - strandat 715.427 kb on + strandat 715.427 kb on + strandat 715.427 kb on + strandat 715.428 kb on - strandat 715.517 kb on + strandat 715.517 kb on + strandat 715.518 kb on - strandat 715.518 kb on - strandat 715.856 kb on + strandat 715.881 kb on + strandat 716.029 kb on + strand, within AO356_03225at 716.029 kb on + strand, within AO356_03225at 716.029 kb on + strand, within AO356_03225at 716.030 kb on - strand, within AO356_03225at 716.053 kb on + strand, within AO356_03225at 716.054 kb on - strand, within AO356_03225at 716.065 kb on + strand, within AO356_03225at 716.066 kb on - strand, within AO356_03225

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Per-strain Table

Position Strand Gene LocusTag Fraction KB-half, Pseudo11 supernatant, 100 uM FeCl3
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713,314 + -0.7
713,314 + -1.4
713,314 + -0.8
713,348 + -0.0
713,348 + -0.7
713,349 - -0.7
713,349 - -1.9
713,418 + +0.8
713,418 + -0.1
713,419 - -1.5
713,419 - -0.7
713,419 - -0.7
713,419 - -1.7
713,419 - -2.2
713,421 + +0.3
713,421 + -1.1
713,422 - -0.7
713,422 - -1.7
713,422 - -1.7
713,530 + +0.6
713,530 + +0.8
713,531 - -1.7
713,531 - +1.7
713,573 + -1.7
713,577 + -1.7
713,578 - -1.7
713,592 + +0.1
713,593 - -1.2
713,598 + -0.7
713,598 + -0.2
713,651 + -1.7
713,742 - -1.7
713,743 + -1.2
713,743 + +0.3
713,743 + +0.6
713,744 - -2.7
713,744 - +0.3
713,744 - -2.2
713,826 - -1.7
713,829 + -0.7
713,830 - -0.7
713,832 + +0.3
713,832 + -1.7
713,833 - -0.7
713,838 + -0.5
713,848 + -0.7
713,848 + -1.7
713,848 + -0.7
713,849 - -0.7
713,849 - -0.7
713,849 - -3.0
713,849 - +0.3
713,849 - -2.2
713,849 - -1.7
713,889 + -2.8
713,889 + -1.5
713,889 + -1.7
713,890 - -0.7
713,892 + -1.7
713,892 + -3.2
713,892 + -1.1
713,892 + -1.2
713,892 + -0.7
713,892 + -0.7
713,892 + -3.0
713,892 + -2.0
713,892 + -1.7
713,892 + -1.7
713,893 - -0.1
713,893 - -1.7
713,893 - -0.7
713,893 - -2.7
714,061 + AO356_03210 0.57 +0.3
714,066 + AO356_03210 0.59 -0.1
714,166 + -0.7
714,166 + -0.1
714,166 + -2.2
714,166 + -0.7
714,166 + -1.1
714,167 - -0.7
714,167 - -0.7
714,167 - -2.2
714,169 + -2.2
714,170 - -1.7
714,170 - -0.7
714,293 + -1.7
714,294 - +0.2
714,340 - -0.8
714,340 - -0.3
714,510 + AO356_03215 0.22 -1.5
714,511 - AO356_03215 0.23 +0.3
714,525 - AO356_03215 0.24 -1.0
714,554 + AO356_03215 0.27 -1.7
714,555 - AO356_03215 0.27 -2.2
714,613 + AO356_03215 0.33 -0.7
714,613 + AO356_03215 0.33 -1.2
714,613 + AO356_03215 0.33 -1.5
714,613 + AO356_03215 0.33 -0.7
714,613 + AO356_03215 0.33 +0.9
714,614 - AO356_03215 0.33 -0.7
714,614 - AO356_03215 0.33 -2.2
714,905 + AO356_03215 0.63 -0.7
714,905 + AO356_03215 0.63 -2.0
714,905 + AO356_03215 0.63 -0.7
714,905 + AO356_03215 0.63 -0.7
714,905 + AO356_03215 0.63 -0.2
714,906 - AO356_03215 0.63 -1.4
714,906 - AO356_03215 0.63 +0.9
714,906 - AO356_03215 0.63 -1.7
714,906 - AO356_03215 0.63 +0.3
714,906 - AO356_03215 0.63 -1.2
714,906 - AO356_03215 0.63 -0.7
714,932 + AO356_03215 0.66 +0.9
714,932 + AO356_03215 0.66 +2.3
714,932 + AO356_03215 0.66 -1.4
714,932 + AO356_03215 0.66 +0.9
714,932 + AO356_03215 0.66 +0.3
714,933 - AO356_03215 0.66 -0.1
714,933 - AO356_03215 0.66 -0.7
714,933 - AO356_03215 0.66 -1.7
714,935 + AO356_03215 0.66 -0.7
714,935 + AO356_03215 0.66 -1.7
714,936 - AO356_03215 0.66 -0.1
715,077 - AO356_03215 0.81 -0.2
715,077 - AO356_03215 0.81 +1.3
715,088 + AO356_03215 0.82 -1.7
715,088 + AO356_03215 0.82 -0.7
715,088 + AO356_03215 0.82 -0.7
715,088 + AO356_03215 0.82 -0.7
715,088 + AO356_03215 0.82 -0.7
715,088 + AO356_03215 0.82 -1.1
715,088 + AO356_03215 0.82 -0.2
715,088 + AO356_03215 0.82 -2.2
715,088 + AO356_03215 0.82 -0.7
715,088 + AO356_03215 0.82 -2.2
715,089 - AO356_03215 0.82 -0.7
715,089 - AO356_03215 0.82 -0.7
715,089 - AO356_03215 0.82 -3.0
715,089 - AO356_03215 0.82 +0.3
715,089 - AO356_03215 0.82 -1.1
715,089 - AO356_03215 0.82 +1.3
715,121 + AO356_03215 0.85 -2.5
715,121 + AO356_03215 0.85 -2.2
715,122 - AO356_03215 0.85 -0.7
715,296 - +1.3
715,312 + -0.1
715,312 + -1.7
715,312 + +2.1
715,313 - -0.3
715,313 - +0.1
715,313 - +1.3
715,328 - +0.9
715,427 + +0.0
715,427 + +0.3
715,427 + -0.7
715,428 - +0.1
715,517 + +0.3
715,517 + +0.3
715,518 - -1.4
715,518 - +1.1
715,856 + -1.7
715,881 + -0.7
716,029 + AO356_03225 0.27 -0.7
716,029 + AO356_03225 0.27 +1.3
716,029 + AO356_03225 0.27 -2.2
716,030 - AO356_03225 0.27 +0.2
716,053 + AO356_03225 0.31 -0.2
716,054 - AO356_03225 0.31 +2.1
716,065 + AO356_03225 0.33 -0.3
716,066 - AO356_03225 0.33 -1.7

Or see this region's nucleotide sequence