Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09195

Experiment: rhizosphere sample 9; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rhizosphere sample 9; outgrowth in LB
1,944,673	+				-0.2
1,944,673	+				+1.2
1,944,673	+				-0.8
1,944,674	-				+0.1
1,944,719	-				+0.2
1,944,719	-				-0.4
1,944,769	+				-0.5
1,944,769	+				-1.0
1,944,769	+				-0.9
1,944,770	-				+0.4
1,944,770	-				-1.5
1,944,791	-		ABZR87_RS09190	0.11	+1.9
1,944,791	-		ABZR87_RS09190	0.11	-0.7
1,944,791	-		ABZR87_RS09190	0.11	+0.4
1,944,809	-		ABZR87_RS09190	0.14	-0.2
1,944,809	-		ABZR87_RS09190	0.14	+1.0
1,945,006	+		ABZR87_RS09190	0.43	-1.6
1,945,007	-		ABZR87_RS09190	0.44	-0.2
1,945,007	-		ABZR87_RS09190	0.44	+1.0
1,945,268	+		ABZR87_RS09190	0.83	-0.8
1,945,269	-		ABZR87_RS09190	0.83	-0.1
1,945,269	-		ABZR87_RS09190	0.83	+0.1
1,945,339	+				-0.0
1,945,369	+				-0.5
1,945,369	+				+0.1
1,945,369	+				-0.3
1,945,369	+				+0.0
1,945,369	+				-0.7
1,945,369	+				-0.8
1,945,369	+				+0.7
1,945,369	+				+0.6
1,945,370	-				-1.8
1,945,370	-				-0.6
1,945,370	-				+0.7
1,945,370	-				+0.3
1,945,370	-				-0.9
1,945,370	-				+0.3
1,945,370	-				-0.1
1,945,370	-				-1.8
1,945,432	+				-1.0
1,945,466	-				+0.8
1,945,553	+		ABZR87_RS09195	0.19	-1.9
1,945,554	-		ABZR87_RS09195	0.19	+1.1
1,945,554	-		ABZR87_RS09195	0.19	-0.4
1,945,571	+		ABZR87_RS09195	0.21	-0.1
1,945,571	+		ABZR87_RS09195	0.21	-0.9
1,945,572	-		ABZR87_RS09195	0.21	+0.4
1,945,572	-		ABZR87_RS09195	0.21	-0.8
1,945,572	-		ABZR87_RS09195	0.21	+0.7
1,945,572	-		ABZR87_RS09195	0.21	+0.7
1,945,572	-		ABZR87_RS09195	0.21	-0.6
1,945,656	+		ABZR87_RS09195	0.31	+1.9
1,945,657	-		ABZR87_RS09195	0.31	-0.3
1,945,700	+		ABZR87_RS09195	0.36	-1.7
1,945,700	+		ABZR87_RS09195	0.36	-2.1
1,945,700	+		ABZR87_RS09195	0.36	-0.1
1,945,700	+		ABZR87_RS09195	0.36	+0.2
1,945,701	-		ABZR87_RS09195	0.36	+1.2
1,945,780	+		ABZR87_RS09195	0.46	-0.3
1,945,780	+		ABZR87_RS09195	0.46	+0.0
1,945,780	+		ABZR87_RS09195	0.46	-0.6
1,945,781	-		ABZR87_RS09195	0.46	-0.2
1,945,781	-		ABZR87_RS09195	0.46	+0.4
1,945,781	-		ABZR87_RS09195	0.46	-0.5
1,945,781	-		ABZR87_RS09195	0.46	-0.3
1,945,781	-		ABZR87_RS09195	0.46	-0.3
1,946,012	+		ABZR87_RS09195	0.73	-0.6
1,946,012	+		ABZR87_RS09195	0.73	-0.4
1,946,012	+		ABZR87_RS09195	0.73	-0.7
1,946,012	+		ABZR87_RS09195	0.73	-0.4
1,946,012	+		ABZR87_RS09195	0.73	+0.7
1,946,012	+		ABZR87_RS09195	0.73	-1.3
1,946,013	-		ABZR87_RS09195	0.73	+5.2
1,946,013	-		ABZR87_RS09195	0.73	-0.1
1,946,013	-		ABZR87_RS09195	0.73	-0.5
1,946,096	+		ABZR87_RS09195	0.83	+2.2
1,946,096	+		ABZR87_RS09195	0.83	+1.1
1,946,096	+		ABZR87_RS09195	0.83	-0.5
1,946,276	+				-1.1
1,946,277	-				-0.4
1,946,277	-				-0.8
1,946,277	-				+0.4
1,946,277	-				-2.4
1,946,292	-				+0.7
1,946,292	-				-0.3
1,946,292	-				-0.1
1,946,303	+				-2.2
1,946,303	+				+0.8
1,946,303	+				+0.7
1,946,303	+				-1.3
1,946,303	+				-0.9
1,946,303	+				-1.0
1,946,303	+				+0.8
1,946,303	+				-0.1
1,946,361	+				-0.1
1,946,362	-				-0.4
1,946,366	+				+0.8
1,946,366	+				+1.2
1,946,366	+				-0.2
1,946,366	+				+1.8
1,946,366	+				-0.5
1,946,366	+				-0.1
1,946,366	+				-0.4
1,946,366	+				+0.6
1,946,366	+				-0.7
1,946,366	+				-0.8
1,946,366	+				-1.7
1,946,366	+				+0.3
1,946,366	+				+0.3
1,946,366	+				+1.0
1,946,366	+				+0.7
1,946,366	+				-0.6
1,946,366	+				-0.8
1,946,366	+				+2.9
1,946,366	+				-0.3
1,946,367	-				-0.2
1,946,367	-				+0.1
1,946,367	-				-0.7
1,946,367	-				+0.0
1,946,367	-				+0.9
1,946,367	-				-0.9
1,946,367	-				-0.4
1,946,367	-				+0.7
1,946,367	-				-1.2
1,946,367	-				-1.2
1,946,367	-				-1.3
1,946,524	+				+1.0
1,946,524	+				-0.8
1,946,524	+				-1.4
1,946,525	-				+0.4
1,946,578	+				+0.2
1,946,578	+				-0.6
1,946,578	+				+0.8
1,946,579	-				+1.0
1,946,683	+		ABZR87_RS09200	0.14	+0.5
1,946,683	+		ABZR87_RS09200	0.14	-0.4
1,946,683	+		ABZR87_RS09200	0.14	+0.5
1,946,683	+		ABZR87_RS09200	0.14	+1.1
1,946,683	+		ABZR87_RS09200	0.14	+0.2
1,946,683	+		ABZR87_RS09200	0.14	-1.2
1,946,683	+		ABZR87_RS09200	0.14	-0.5
1,946,684	-		ABZR87_RS09200	0.14	-1.4
1,946,684	-		ABZR87_RS09200	0.14	-0.4
1,946,684	-		ABZR87_RS09200	0.14	+0.1
1,946,684	-		ABZR87_RS09200	0.14	+0.8
1,946,684	-		ABZR87_RS09200	0.14	-0.3
1,946,684	-		ABZR87_RS09200	0.14	+1.4
1,946,684	-		ABZR87_RS09200	0.14	-0.8
1,946,684	-		ABZR87_RS09200	0.14	-0.6
1,946,684	-		ABZR87_RS09200	0.14	-2.4
1,946,684	-		ABZR87_RS09200	0.14	+0.2
1,946,684	-		ABZR87_RS09200	0.14	+0.2
1,946,684	-		ABZR87_RS09200	0.14	+0.0
1,946,716	+		ABZR87_RS09200	0.16	-0.3
1,946,716	+		ABZR87_RS09200	0.16	-0.0
1,946,719	+		ABZR87_RS09200	0.16	-0.4
1,946,719	+		ABZR87_RS09200	0.16	+0.3
1,946,720	-		ABZR87_RS09200	0.16	+0.7
1,946,720	-		ABZR87_RS09200	0.16	+0.2
1,946,791	+		ABZR87_RS09200	0.20	-0.7
1,946,791	+		ABZR87_RS09200	0.20	-1.3
1,946,791	+		ABZR87_RS09200	0.20	-0.8
1,946,792	-		ABZR87_RS09200	0.20	-0.6
1,946,792	-		ABZR87_RS09200	0.20	-0.6
1,946,912	-		ABZR87_RS09200	0.27	+0.1
1,946,912	-		ABZR87_RS09200	0.27	-0.5
1,946,935	+		ABZR87_RS09200	0.28	+0.3
1,946,935	+		ABZR87_RS09200	0.28	+0.2
1,946,935	+		ABZR87_RS09200	0.28	+0.3
1,946,935	+		ABZR87_RS09200	0.28	+0.6
1,946,935	+		ABZR87_RS09200	0.28	+0.6
1,946,935	+		ABZR87_RS09200	0.28	-0.1
1,946,935	+		ABZR87_RS09200	0.28	-0.2
1,946,935	+		ABZR87_RS09200	0.28	+1.0
1,946,935	+		ABZR87_RS09200	0.28	-0.1
1,946,935	+		ABZR87_RS09200	0.28	-1.2
1,946,935	+		ABZR87_RS09200	0.28	-0.1
1,946,936	-		ABZR87_RS09200	0.29	+1.3
1,946,936	-		ABZR87_RS09200	0.29	+1.3
1,946,936	-		ABZR87_RS09200	0.29	-0.0
1,946,936	-		ABZR87_RS09200	0.29	-1.7
1,946,936	-		ABZR87_RS09200	0.29	-0.3
1,946,937	-		ABZR87_RS09200	0.29	-1.0
1,946,938	-		ABZR87_RS09200	0.29	+0.8
1,947,082	+		ABZR87_RS09200	0.37	+0.6
1,947,082	+		ABZR87_RS09200	0.37	-0.2
1,947,083	-		ABZR87_RS09200	0.37	-1.7
1,947,083	-		ABZR87_RS09200	0.37	-1.4
1,947,083	-		ABZR87_RS09200	0.37	+0.6
1,947,083	-		ABZR87_RS09200	0.37	-0.1
1,947,083	-		ABZR87_RS09200	0.37	-0.6
1,947,083	-		ABZR87_RS09200	0.37	+0.2
1,947,083	-		ABZR87_RS09200	0.37	-3.0
1,947,083	-		ABZR87_RS09200	0.37	-0.2
1,947,235	+		ABZR87_RS09200	0.46	-0.2
1,947,235	+		ABZR87_RS09200	0.46	-0.5
1,947,236	-		ABZR87_RS09200	0.46	+0.8