Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03710 and RR42_RS03715 are separated by 445 nucleotides RR42_RS03715 and RR42_RS03720 are separated by 137 nucleotides
RR42_RS03710: RR42_RS03710 - cytochrome B561, at 818,268 to 818,843
_RS03710
RR42_RS03715: RR42_RS03715 - inositol monophosphatase, at 819,289 to 820,080
_RS03715
RR42_RS03720: RR42_RS03720 - heat-shock protein, at 820,218 to 821,471
_RS03720
Position (kb) 819
820
821 Strain fitness (log2 ratio) -2
-1
0
1 at 818.489 kb on - strand, within RR42_RS03710 at 818.489 kb on - strand, within RR42_RS03710 at 818.513 kb on - strand, within RR42_RS03710 at 818.638 kb on + strand, within RR42_RS03710 at 818.639 kb on - strand, within RR42_RS03710 at 818.639 kb on - strand, within RR42_RS03710 at 818.761 kb on + strand, within RR42_RS03710 at 818.762 kb on - strand, within RR42_RS03710 at 818.762 kb on - strand, within RR42_RS03710 at 818.956 kb on + strand at 818.956 kb on + strand at 818.957 kb on - strand at 818.957 kb on - strand at 818.957 kb on - strand at 818.989 kb on + strand at 818.990 kb on - strand at 818.990 kb on - strand at 819.077 kb on + strand at 819.124 kb on + strand at 819.124 kb on + strand at 819.124 kb on + strand at 819.124 kb on + strand at 819.125 kb on - strand at 819.125 kb on - strand at 819.179 kb on + strand at 819.312 kb on + strand at 819.319 kb on + strand at 819.373 kb on + strand, within RR42_RS03715 at 819.484 kb on + strand, within RR42_RS03715 at 819.862 kb on + strand, within RR42_RS03715 at 819.863 kb on - strand, within RR42_RS03715 at 819.925 kb on + strand, within RR42_RS03715 at 820.053 kb on - strand at 820.117 kb on + strand at 820.117 kb on + strand at 820.117 kb on + strand at 820.118 kb on - strand at 820.118 kb on - strand at 820.118 kb on - strand at 820.118 kb on - strand at 820.188 kb on + strand at 820.240 kb on + strand at 820.692 kb on + strand, within RR42_RS03720 at 820.692 kb on + strand, within RR42_RS03720 at 820.719 kb on + strand, within RR42_RS03720 at 820.720 kb on - strand, within RR42_RS03720 at 820.972 kb on - strand, within RR42_RS03720
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 818,489 - RR42_RS03710 0.38 -0.9 818,489 - RR42_RS03710 0.38 -1.8 818,513 - RR42_RS03710 0.43 +0.3 818,638 + RR42_RS03710 0.64 -0.7 818,639 - RR42_RS03710 0.64 -0.0 818,639 - RR42_RS03710 0.64 -0.6 818,761 + RR42_RS03710 0.86 -0.3 818,762 - RR42_RS03710 0.86 +0.8 818,762 - RR42_RS03710 0.86 +0.4 818,956 + +0.1 818,956 + -0.3 818,957 - -0.2 818,957 - +0.1 818,957 - +0.3 818,989 + +0.4 818,990 - -0.8 818,990 - +0.3 819,077 + +0.1 819,124 + -0.2 819,124 + +1.0 819,124 + +1.0 819,124 + -0.1 819,125 - -0.3 819,125 - +0.1 819,179 + -0.7 819,312 + -0.9 819,319 + -0.4 819,373 + RR42_RS03715 0.11 +0.8 819,484 + RR42_RS03715 0.25 -1.2 819,862 + RR42_RS03715 0.72 +0.8 819,863 - RR42_RS03715 0.72 +1.2 819,925 + RR42_RS03715 0.80 +0.7 820,053 - +1.0 820,117 + -0.3 820,117 + -0.9 820,117 + +1.0 820,118 - +0.5 820,118 - -0.2 820,118 - +0.2 820,118 - +0.3 820,188 + +0.1 820,240 + -0.8 820,692 + RR42_RS03720 0.38 +0.3 820,692 + RR42_RS03720 0.38 +0.0 820,719 + RR42_RS03720 0.40 -1.2 820,720 - RR42_RS03720 0.40 -0.3 820,972 - RR42_RS03720 0.60 +0.2
Or see this region's nucleotide sequence