Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_986

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
1,114,851	-		Pf1N1B4_985	0.34	+0.9
1,114,851	-		Pf1N1B4_985	0.34	+0.7
1,114,973	+		Pf1N1B4_985	0.42	-0.7
1,114,973	+		Pf1N1B4_985	0.42	+1.5
1,114,973	+		Pf1N1B4_985	0.42	+0.8
1,114,974	-		Pf1N1B4_985	0.42	+0.1
1,114,974	-		Pf1N1B4_985	0.42	+0.1
1,114,974	-		Pf1N1B4_985	0.42	-1.2
1,114,974	-		Pf1N1B4_985	0.42	+1.4
1,115,039	+				-1.9
1,115,039	+		Pf1N1B4_985	0.47	-0.7
1,115,040	-		Pf1N1B4_985	0.47	+1.5
1,115,040	-		Pf1N1B4_985	0.47	-2.7
1,115,040	-		Pf1N1B4_985	0.47	+0.9
1,115,279	+		Pf1N1B4_985	0.63	+0.3
1,115,321	+		Pf1N1B4_985	0.66	-1.0
1,115,322	-		Pf1N1B4_985	0.66	-1.7
1,115,322	-		Pf1N1B4_985	0.66	+0.9
1,115,382	-		Pf1N1B4_985	0.70	+0.6
1,115,382	-		Pf1N1B4_985	0.70	+1.4
1,115,471	+		Pf1N1B4_985	0.75	+1.1
1,115,471	+		Pf1N1B4_985	0.75	+0.5
1,115,472	-		Pf1N1B4_985	0.76	-2.2
1,115,472	-		Pf1N1B4_985	0.76	-3.3
1,115,636	+		Pf1N1B4_985	0.86	+0.4
1,115,636	+		Pf1N1B4_985	0.86	+1.0
1,115,636	+		Pf1N1B4_985	0.86	-0.9
1,115,636	+		Pf1N1B4_985	0.86	-0.9
1,115,637	-		Pf1N1B4_985	0.87	-0.1
1,115,637	-		Pf1N1B4_985	0.87	-0.3
1,115,637	-		Pf1N1B4_985	0.87	-0.0
1,115,637	-		Pf1N1B4_985	0.87	-0.5
1,115,770	+				+0.3
1,115,835	+				+0.1
1,115,836	-				-0.6
1,115,836	-				-1.5
1,116,184	+		Pf1N1B4_986	0.23	+0.9
1,116,184	+				-1.2
1,116,185	-				+0.7
1,116,185	-		Pf1N1B4_986	0.23	-0.1
1,116,185	-		Pf1N1B4_986	0.23	-0.7
1,116,607	+		Pf1N1B4_986	0.52	+1.7
1,116,607	+		Pf1N1B4_986	0.52	-0.3
1,116,608	-		Pf1N1B4_986	0.52	-1.1
1,116,637	+		Pf1N1B4_986	0.54	-0.9
1,116,637	+		Pf1N1B4_986	0.54	-0.2
1,116,756	+		Pf1N1B4_986	0.62	+2.3
1,116,806	-		Pf1N1B4_986	0.65	-0.2
1,116,827	-		Pf1N1B4_986	0.67	-2.2
1,116,863	-		Pf1N1B4_986	0.69	-0.9
1,116,971	-		Pf1N1B4_986	0.76	+0.4
1,116,988	+		Pf1N1B4_986	0.77	+0.3
1,116,988	+				+2.1
1,116,988	+		Pf1N1B4_986	0.77	-0.5
1,116,988	+		Pf1N1B4_986	0.77	-0.7
1,116,988	+		Pf1N1B4_986	0.77	-1.2
1,116,989	-		Pf1N1B4_986	0.77	+1.0
1,116,989	-		Pf1N1B4_986	0.77	+1.9
1,116,989	-		Pf1N1B4_986	0.77	+0.1
1,117,159	+		Pf1N1B4_986	0.89	+0.4
1,117,159	+		Pf1N1B4_986	0.89	+0.1
1,117,159	+		Pf1N1B4_986	0.89	-0.4
1,117,159	+		Pf1N1B4_986	0.89	-0.2
1,117,160	-		Pf1N1B4_986	0.89	-0.3
1,117,160	-		Pf1N1B4_986	0.89	-0.3
1,117,160	-		Pf1N1B4_986	0.89	+0.7
1,117,160	-		Pf1N1B4_986	0.89	+0.9
1,117,160	-		Pf1N1B4_986	0.89	+1.0
1,117,160	-		Pf1N1B4_986	0.89	-1.3
1,117,262	-				-1.9
1,117,283	-				-0.5
1,117,500	+				+1.1
1,117,501	-				-2.2
1,117,501	-				+3.1
1,117,501	-				+0.4
1,117,501	-				-1.2
1,117,570	-		Pf1N1B4_987	0.14	+0.4
1,117,744	-		Pf1N1B4_987	0.25	-1.5
1,117,744	-		Pf1N1B4_987	0.25	+0.3
1,117,744	-		Pf1N1B4_987	0.25	+1.0
1,117,774	+		Pf1N1B4_987	0.27	+1.1
1,117,785	+		Pf1N1B4_987	0.27	+0.5
1,117,786	-		Pf1N1B4_987	0.27	+1.4
1,117,786	-		Pf1N1B4_987	0.27	+0.4
1,118,047	-		Pf1N1B4_987	0.44	+0.7
1,118,047	-		Pf1N1B4_987	0.44	+0.7
1,118,047	-		Pf1N1B4_987	0.44	-0.3
1,118,090	+		Pf1N1B4_987	0.47	+0.8
1,118,090	+		Pf1N1B4_987	0.47	-1.7
1,118,090	+		Pf1N1B4_987	0.47	+0.7
1,118,091	-				+1.1
1,118,091	-		Pf1N1B4_987	0.47	-0.5
1,118,091	-		Pf1N1B4_987	0.47	-0.6
1,118,091	-				+0.5
1,118,091	-		Pf1N1B4_987	0.47	+0.6
1,118,091	-		Pf1N1B4_987	0.47	-1.4
1,118,108	+		Pf1N1B4_987	0.48	-0.5
1,118,108	+		Pf1N1B4_987	0.48	+0.6
1,118,109	-		Pf1N1B4_987	0.48	-0.7
1,118,209	-		Pf1N1B4_987	0.54	-1.3
1,118,214	+		Pf1N1B4_987	0.54	+0.5
1,118,250	+		Pf1N1B4_987	0.57	+0.4
1,118,250	+		Pf1N1B4_987	0.57	+0.2
1,118,250	+		Pf1N1B4_987	0.57	+1.1
1,118,250	+		Pf1N1B4_987	0.57	-1.5
1,118,250	+		Pf1N1B4_987	0.57	+2.3
1,118,251	-		Pf1N1B4_987	0.57	+0.5
1,118,251	-		Pf1N1B4_987	0.57	-0.6