Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_983

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
1,110,634	-		Pf1N1B4_982	0.38	+0.1
1,110,703	-				+0.5
1,110,703	-		Pf1N1B4_982	0.43	-1.5
1,110,703	-		Pf1N1B4_982	0.43	+1.2
1,110,762	+		Pf1N1B4_982	0.48	+0.1
1,110,762	+		Pf1N1B4_982	0.48	+1.1
1,110,763	-		Pf1N1B4_982	0.48	-2.0
1,110,763	-		Pf1N1B4_982	0.48	-0.9
1,110,763	-		Pf1N1B4_982	0.48	+0.1
1,110,763	-		Pf1N1B4_982	0.48	+0.4
1,110,763	-		Pf1N1B4_982	0.48	+0.1
1,110,763	-		Pf1N1B4_982	0.48	+1.5
1,110,763	-				+1.1
1,110,763	-		Pf1N1B4_982	0.48	+0.9
1,110,763	-		Pf1N1B4_982	0.48	+0.5
1,110,763	-		Pf1N1B4_982	0.48	-0.5
1,110,897	+				-0.5
1,110,898	-		Pf1N1B4_982	0.58	+0.1
1,110,900	+		Pf1N1B4_982	0.58	+0.3
1,110,900	+		Pf1N1B4_982	0.58	-0.3
1,110,900	+		Pf1N1B4_982	0.58	-1.7
1,110,900	+				+1.1
1,110,900	+		Pf1N1B4_982	0.58	-1.2
1,110,901	-		Pf1N1B4_982	0.58	-0.7
1,110,901	-		Pf1N1B4_982	0.58	-0.9
1,110,901	-		Pf1N1B4_982	0.58	-0.3
1,110,901	-		Pf1N1B4_982	0.58	-1.9
1,110,901	-		Pf1N1B4_982	0.58	+0.1
1,110,901	-		Pf1N1B4_982	0.58	-0.5
1,110,901	-		Pf1N1B4_982	0.58	-0.5
1,110,901	-		Pf1N1B4_982	0.58	+1.8
1,110,963	+		Pf1N1B4_982	0.63	-0.8
1,111,186	-		Pf1N1B4_982	0.80	-0.2
1,111,186	-		Pf1N1B4_982	0.80	-1.5
1,111,186	-		Pf1N1B4_982	0.80	-0.5
1,111,203	+		Pf1N1B4_982	0.81	+0.1
1,111,204	-		Pf1N1B4_982	0.81	+1.0
1,111,233	+		Pf1N1B4_982	0.84	-0.9
1,111,234	-		Pf1N1B4_982	0.84	-0.2
1,111,234	-		Pf1N1B4_982	0.84	+1.1
1,111,234	-		Pf1N1B4_982	0.84	-2.7
1,111,234	-		Pf1N1B4_982	0.84	+1.4
1,111,234	-		Pf1N1B4_982	0.84	+0.8
1,111,234	-		Pf1N1B4_982	0.84	-1.7
1,111,463	-				+0.5
1,111,508	-				+1.1
1,111,538	-				-1.7
1,111,567	+				-0.7
1,111,567	+				-0.9
1,111,567	+				-1.0
1,111,568	-				-1.0
1,111,631	+				-0.5
1,111,680	+				+0.3
1,111,680	+				-0.5
1,111,680	+				+0.1
1,111,680	+				+0.7
1,111,681	-				+0.7
1,111,685	-				+0.4
1,111,691	-				+0.5
1,111,718	+				+0.4
1,111,718	+				+3.2
1,111,719	-				+1.1
1,111,751	+				+0.4
1,111,751	+				+0.4
1,111,752	-				-1.1
1,111,752	-				+0.3
1,111,752	-				+0.4
1,111,752	-				+0.5
1,111,752	-				-0.5
1,111,752	-				-0.0
1,111,752	-				+1.1
1,111,752	-				+0.2
1,111,830	+		Pf1N1B4_983	0.13	+0.2
1,111,830	+				-1.5
1,111,830	+		Pf1N1B4_983	0.13	+0.7
1,111,831	-		Pf1N1B4_983	0.13	-1.0
1,111,897	+		Pf1N1B4_983	0.18	-0.1
1,111,897	+		Pf1N1B4_983	0.18	-0.5
1,111,897	+		Pf1N1B4_983	0.18	-0.9
1,111,897	+		Pf1N1B4_983	0.18	-0.5
1,111,898	-		Pf1N1B4_983	0.18	-1.2
1,111,898	-		Pf1N1B4_983	0.18	+0.0
1,111,898	-		Pf1N1B4_983	0.18	+0.8
1,111,898	-		Pf1N1B4_983	0.18	+0.3
1,111,898	-		Pf1N1B4_983	0.18	-1.7
1,111,951	-		Pf1N1B4_983	0.22	+0.5
1,112,304	+		Pf1N1B4_983	0.45	+1.4
1,112,304	+		Pf1N1B4_983	0.45	-0.2
1,112,562	+				+0.8
1,112,562	+		Pf1N1B4_983	0.63	+0.9
1,112,562	+		Pf1N1B4_983	0.63	-0.8
1,112,563	-		Pf1N1B4_983	0.63	-0.5
1,112,563	-		Pf1N1B4_983	0.63	-0.0
1,112,563	-		Pf1N1B4_983	0.63	-0.1
1,112,563	-		Pf1N1B4_983	0.63	-0.2
1,112,563	-		Pf1N1B4_983	0.63	-0.3
1,112,669	+		Pf1N1B4_983	0.70	-0.5
1,112,743	+		Pf1N1B4_983	0.75	-1.9
1,112,823	+		Pf1N1B4_983	0.80	-0.3
1,112,858	+		Pf1N1B4_983	0.83	-0.9
1,112,858	+		Pf1N1B4_983	0.83	-1.1
1,112,859	-		Pf1N1B4_983	0.83	+0.9
1,112,916	+		Pf1N1B4_983	0.87	+0.1
1,112,916	+		Pf1N1B4_983	0.87	-1.2
1,112,917	-		Pf1N1B4_983	0.87	+1.3
1,112,920	-		Pf1N1B4_983	0.87	+0.5
1,112,920	-		Pf1N1B4_983	0.87	-0.0
1,112,920	-		Pf1N1B4_983	0.87	+0.5
1,112,920	-		Pf1N1B4_983	0.87	-1.2
1,112,920	-		Pf1N1B4_983	0.87	-0.2
1,112,952	+		Pf1N1B4_983	0.89	-1.2
1,112,952	+				+2.4
1,112,952	+				-1.7
1,112,953	-		Pf1N1B4_983	0.89	+0.3
1,112,953	-		Pf1N1B4_983	0.89	+0.4
1,113,131	-				-0.1
1,113,131	-				+0.4
1,113,148	+				+0.1
1,113,148	+				-0.3
1,113,174	+				-0.2
1,113,174	+				+0.3
1,113,174	+				+2.3
1,113,175	-				-2.0
1,113,175	-				+1.5
1,113,526	-		Pf1N1B4_984	0.32	-1.9
1,113,643	+		Pf1N1B4_984	0.42	+1.4
1,113,693	-		Pf1N1B4_984	0.46	+0.4
1,113,701	+		Pf1N1B4_984	0.47	-0.9
1,113,701	+		Pf1N1B4_984	0.47	-1.5
1,113,701	+		Pf1N1B4_984	0.47	+1.5
1,113,701	+		Pf1N1B4_984	0.47	+0.3
1,113,701	+		Pf1N1B4_984	0.47	+1.4
1,113,701	+		Pf1N1B4_984	0.47	+2.1
1,113,702	-		Pf1N1B4_984	0.47	+2.3
1,113,856	-		Pf1N1B4_984	0.60	-0.2
1,113,856	-		Pf1N1B4_984	0.60	-2.8
1,113,856	-				-0.9
1,113,989	+		Pf1N1B4_984	0.72	-0.5