Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5829
Experiment: Spectinomycin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.05 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 263,507 | + | +0.7 | |||
| 263,511 | + | -0.3 | |||
| 263,515 | + | -1.0 | |||
| 263,515 | + | -0.4 | |||
| 263,920 | - | Pf1N1B4_5829 | 0.39 | -0.8 | |
| 264,037 | - | Pf1N1B4_5829 | 0.54 | -1.3 | |
| 264,498 | + | Pf1N1B4_5830 | 0.15 | -0.7 | |
| 264,499 | - | Pf1N1B4_5830 | 0.15 | -0.3 | |
| 264,672 | + | Pf1N1B4_5830 | 0.37 | +0.2 | |
| 264,771 | + | Pf1N1B4_5830 | 0.50 | -0.4 | |
| 264,883 | - | Pf1N1B4_5830 | 0.65 | +2.1 | |
| 264,906 | + | -1.0 | |||
| 264,924 | + | Pf1N1B4_5830 | 0.70 | -0.4 | |
| 264,925 | - | Pf1N1B4_5830 | 0.70 | +1.3 | |
| 265,359 | - | -0.4 | |||
| 265,359 | - | +0.8 | |||
| 265,378 | - | +1.0 |
Or see this region's nucleotide sequence