Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5600

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
21,621	+				-0.4
21,934	-				-0.1
22,063	+		Pf1N1B4_5599	0.46	+0.8
22,064	-		Pf1N1B4_5599	0.46	+1.4
22,351	+				+0.5
22,359	-				-0.2
22,377	+				-0.2
22,592	+				-0.5
22,592	+				-0.3
22,592	+				+1.9
22,592	+				-1.3
22,592	+				-2.2
22,592	+				+1.1
22,593	-				-0.3
22,593	-				-0.8
22,593	-				-1.8
22,593	-				-0.8
22,593	-				+0.0
22,593	-				+0.8
22,593	-				-0.6
22,593	-				+1.3
22,593	-				-0.2
22,606	-		Pf1N1B4_5600	0.11	-0.7
22,707	-		Pf1N1B4_5600	0.20	-1.5
22,707	-		Pf1N1B4_5600	0.20	+0.3
22,707	-		Pf1N1B4_5600	0.20	-1.8
22,721	+		Pf1N1B4_5600	0.21	-0.7
22,721	+		Pf1N1B4_5600	0.21	+0.2
22,721	+		Pf1N1B4_5600	0.21	+1.5
22,722	-		Pf1N1B4_5600	0.21	+0.5
22,932	-		Pf1N1B4_5600	0.40	+0.5
22,932	-		Pf1N1B4_5600	0.40	+1.0
23,018	+		Pf1N1B4_5600	0.48	-1.5
23,019	-				+0.9
23,019	-		Pf1N1B4_5600	0.48	+1.6
23,019	-		Pf1N1B4_5600	0.48	-0.5
23,019	-		Pf1N1B4_5600	0.48	-2.1
23,199	-				-0.5
23,210	+		Pf1N1B4_5600	0.66	-2.1
23,424	-		Pf1N1B4_5600	0.85	+0.5
23,424	-		Pf1N1B4_5600	0.85	-1.2
23,551	+				-0.3
23,552	-				-0.9
23,571	+				-1.8
23,630	+				+0.5
23,634	-				-0.1
23,648	+				+0.8
23,648	+				-2.3
23,649	-				-1.6
23,649	-				+0.5
23,724	-				+0.2
23,736	+				+0.5
23,739	-				+0.8
23,739	-				-0.5
23,819	+		Pf1N1B4_5601	0.14	-1.3
23,846	+		Pf1N1B4_5601	0.16	-1.3
23,933	+		Pf1N1B4_5601	0.23	+0.3
23,933	+				-0.5
24,128	+		Pf1N1B4_5601	0.37	+0.2
24,227	+		Pf1N1B4_5601	0.45	+0.3
24,227	+		Pf1N1B4_5601	0.45	+0.2
24,228	-		Pf1N1B4_5601	0.45	-2.3
24,333	-		Pf1N1B4_5601	0.53	-0.5
24,533	+		Pf1N1B4_5601	0.68	+0.5
24,533	+		Pf1N1B4_5601	0.68	-2.6
24,534	-		Pf1N1B4_5601	0.68	+1.1
24,584	+		Pf1N1B4_5601	0.71	+0.8
24,585	-		Pf1N1B4_5601	0.71	-0.5