Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5446

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
191,139	-				+0.9
191,139	-				-1.0
191,139	-				-0.7
191,139	-				+0.0
191,139	-				+0.7
191,139	-				-1.7
191,193	-				-1.5
191,193	-				-0.7
191,193	-				-2.0
191,193	-				+0.3
191,193	-				+0.0
191,193	-				+0.2
191,193	-				+1.2
191,225	-				-0.9
191,237	-				-0.1
191,283	-				+1.3
191,289	+				-0.5
191,289	+				+0.4
191,289	+				-0.0
191,290	-				-0.7
191,290	-				+0.5
191,290	-				-2.8
191,290	-				-0.1
191,290	-				+0.3
191,293	+				+2.4
191,293	+				-0.7
191,294	-				+0.4
191,294	-				+0.1
191,294	-				-0.7
191,294	-				+0.6
191,335	+				+0.8
191,335	+				-0.4
191,335	+				-0.4
191,336	-				-0.1
191,336	-				-0.4
191,336	-				-2.0
191,339	+				-2.0
191,339	+				+1.9
191,340	-				+1.2
191,340	-				+0.2
191,340	-				+1.4
191,340	-				+2.2
191,340	-				-0.7
191,340	-				+0.9
191,430	+				+2.4
191,432	+				-2.0
191,433	-				-0.4
191,478	+				+1.5
191,537	+				+0.9
191,537	+				-2.0
191,537	+				+0.0
191,537	+				-0.8
191,537	+				-0.1
191,537	+				+1.2
191,537	+				+0.1
191,538	-				+0.9
191,538	-				+0.9
191,538	-				+0.6
191,538	-				+0.4
191,538	-				+0.2
191,538	-				+0.1
191,541	+				+0.9
191,542	-				+0.0
191,576	-				-0.1
191,576	-				+0.0
191,603	-				-0.1
191,615	+				-2.0
191,616	-				+0.4
191,628	+				-1.1
191,628	+				-0.7
191,628	+				+1.3
191,628	+				-0.6
191,628	+				+0.0
191,628	+				-2.1
191,628	+				-1.0
191,629	-				+1.7
191,629	-				-0.5
191,629	-				+0.3
191,629	-				+2.4
191,632	+				-0.1
191,697	+				+0.5
191,697	+				-3.0
191,698	-				-0.8
191,716	+				-1.6
191,717	-				+0.5
191,717	-				+2.1
191,717	-				-0.4
191,719	+				-2.0
191,720	-				+0.4
191,720	-				-1.7
191,720	-				+1.1
191,720	-				-0.7
191,720	-				+1.7
191,737	+				+0.6
191,738	-				+0.0
191,781	-				-0.5
191,802	-				-0.3
191,802	-				+0.9
191,802	-				+0.3
191,815	-				+2.1
191,815	-				+0.5
191,815	-				+0.7
191,836	+				-1.5
191,837	-				-2.0
191,837	-				-1.3
191,851	+				+0.9
191,852	-				-0.3
191,881	-				+0.1
191,892	+				+0.4
191,893	-				-1.7
191,893	-				+1.4
191,893	-				-1.1
191,906	+				-0.1
191,906	+				-0.1
191,907	-				-0.6
191,907	-				+0.9
191,907	-				+0.6
191,907	-				-0.3
191,927	+				-0.6
191,927	+				+0.4
191,927	+				+0.6
191,927	+				+1.0
191,927	+				-1.0
191,927	+				-0.1
191,928	-				-0.5
191,928	-				+0.7
191,928	-				-0.5
191,928	-				-0.7
191,928	-				-0.7
191,928	-				+0.9
191,928	-				-0.7
191,928	-				-1.0
191,928	-				-0.7
191,928	-				-2.3
191,928	-				-2.3
191,928	-				+0.3
192,086	-				+1.1
192,086	-				-1.3
192,086	-				+0.7
192,129	-				-0.3
192,137	+				+0.5
192,137	+				+0.9
192,172	-		Pf1N1B4_5446	0.20	-2.6
192,229	+		Pf1N1B4_5446	0.52	-2.6
192,229	+		Pf1N1B4_5446	0.52	-0.7
192,230	-		Pf1N1B4_5446	0.52	-1.6
192,230	-		Pf1N1B4_5446	0.52	+0.4
192,230	-		Pf1N1B4_5446	0.52	-0.6
192,249	-		Pf1N1B4_5446	0.63	-0.3
192,387	+		Pf1N1B4_5447	0.13	+0.0
192,388	-		Pf1N1B4_5447	0.13	+1.0
192,388	-		Pf1N1B4_5447	0.13	-0.4
192,388	-		Pf1N1B4_5447	0.13	+0.4
192,388	-		Pf1N1B4_5447	0.13	-0.1
192,412	+		Pf1N1B4_5447	0.26	+0.3
192,441	-				+0.9
192,441	-		Pf1N1B4_5447	0.41	-0.2
192,441	-				+0.9
192,540	+				-1.0
192,540	+				-0.1
192,541	-				-0.1
192,541	-				+0.4
192,541	-				+0.5
192,541	-				+0.9
192,541	-				+0.3
192,551	+				-0.1
192,552	-				-0.5
192,552	-				+0.3
192,571	-				+1.2
192,573	+				-0.6
192,574	-				-0.7
192,574	-				+0.3
192,635	-				+0.1
192,671	-				+1.1
192,671	-				-1.5
192,671	-				+0.3
192,677	+				-2.1
192,677	+				-0.0
192,678	-				+1.3
192,678	-				+0.6
192,678	-				+0.4
192,678	-				-0.1
192,678	-				+1.5
192,678	-				-0.2
192,678	-				-2.1
192,678	-				+0.6
192,678	-				+0.0
192,678	-				+0.1
192,678	-				-2.0
192,678	-				+0.2
192,678	-				-2.0
192,678	-				+0.0
192,678	-				+1.6
192,678	-				+0.9
192,678	-				+1.2
192,678	-				-0.8
192,678	-				+0.9
192,678	-				+0.2
192,733	-				+0.5
192,733	-				-0.2
192,733	-				+0.7
192,733	-				-0.2
192,740	+				+0.2
192,741	-				-0.5
192,741	-				+0.4
192,741	-				-2.2
192,741	-				-1.0
192,741	-				-0.8
192,761	+				-1.0
192,761	+				+3.0
192,761	+				+1.4
192,761	+				-1.3
192,762	-				+1.2
192,762	-				+1.1
192,762	-				-0.7
192,762	-				+1.0
192,762	-				+1.3
192,762	-				-1.0
192,762	-				-0.4
192,762	-				+0.1
192,762	-				+1.7
192,762	-				-0.8
192,762	-				-0.5
192,762	-				+0.6
192,762	-				+0.1
192,762	-				+1.5
192,762	-				-0.4
192,762	-				+0.5
192,762	-				-0.6
192,762	-				-0.9
192,762	-				+0.4
192,762	-				-0.0
192,762	-				-0.1
192,853	-				-0.7
192,853	-				+0.3
192,853	-				+0.8
192,863	-				-0.8
192,863	-				+0.8
192,863	-				+0.7
192,863	-				-0.4
192,863	-				+0.9
192,863	-				-0.7
192,863	-				-0.2
192,863	-				-0.5
192,863	-				+0.4
192,863	-				-0.8
192,863	-				-1.1
192,934	-				+1.1
192,934	-				-0.1
192,945	-				-0.1
192,945	-				+0.3
192,945	-				-0.1
193,010	-				+0.9
193,066	-				+2.2
193,066	-				+0.6
193,123	+				+0.2
193,146	+				+0.6
193,147	-				+0.2
193,147	-				+2.4
193,170	-				+0.5
193,170	-				-0.4
193,208	+				-0.1
193,209	-				+1.2
193,209	-				+0.3
193,267	-				+0.5
193,267	-				+0.8
193,267	-				+0.7
193,267	-				-0.1