Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5129

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
5,705,432	-		Pf1N1B4_5128	0.23	+0.2
5,705,432	-		Pf1N1B4_5128	0.23	+0.8
5,705,581	+		Pf1N1B4_5128	0.43	-1.2
5,705,581	+		Pf1N1B4_5128	0.43	-1.0
5,705,581	+		Pf1N1B4_5128	0.43	-1.7
5,705,582	-		Pf1N1B4_5128	0.43	-0.7
5,705,582	-				-0.6
5,705,586	-		Pf1N1B4_5128	0.44	+0.0
5,705,723	-		Pf1N1B4_5128	0.62	-0.4
5,705,757	-		Pf1N1B4_5128	0.66	+0.8
5,705,882	-		Pf1N1B4_5128	0.83	-1.7
5,705,894	+		Pf1N1B4_5128	0.84	-2.4
5,705,894	+		Pf1N1B4_5128	0.84	+0.8
5,705,895	-				+2.0
5,705,896	+		Pf1N1B4_5128	0.84	+1.2
5,705,896	+		Pf1N1B4_5128	0.84	+1.5
5,705,896	+		Pf1N1B4_5128	0.84	-0.6
5,705,896	+		Pf1N1B4_5128	0.84	-0.6
5,705,896	+				+1.8
5,705,897	-		Pf1N1B4_5128	0.85	-2.2
5,705,897	-		Pf1N1B4_5128	0.85	+0.0
5,705,897	-		Pf1N1B4_5128	0.85	-0.6
5,705,897	-		Pf1N1B4_5128	0.85	+0.1
5,705,897	-		Pf1N1B4_5128	0.85	+1.0
5,705,897	-		Pf1N1B4_5128	0.85	-1.9
5,705,954	+				+0.2
5,706,051	+				+0.4
5,706,052	-				-1.0
5,706,158	+				-0.3
5,706,158	+				+0.3
5,706,158	+				-1.9
5,706,158	+				+1.0
5,706,159	-				-0.7
5,706,159	-				+0.0
5,706,327	+				+0.6
5,706,327	+				-1.1
5,706,327	+				-1.7
5,706,328	-				-2.2
5,706,328	-				-0.8
5,706,328	-				-1.2
5,706,328	-				-2.2
5,706,425	-				-0.1
5,706,454	-				-0.6
5,706,521	-				+1.4
5,706,521	-				-0.8
5,706,521	-				+0.7
5,706,749	-		Pf1N1B4_5129	0.23	-1.4
5,706,749	-		Pf1N1B4_5129	0.23	-0.3
5,706,850	+		Pf1N1B4_5129	0.30	-0.4
5,706,898	+				+0.4
5,706,958	+		Pf1N1B4_5129	0.38	-1.6
5,706,959	-		Pf1N1B4_5129	0.38	-2.4
5,706,959	-		Pf1N1B4_5129	0.38	-2.4
5,706,959	-		Pf1N1B4_5129	0.38	-0.6
5,706,959	-		Pf1N1B4_5129	0.38	-0.0
5,707,177	+		Pf1N1B4_5129	0.54	+0.6
5,707,178	-		Pf1N1B4_5129	0.54	-0.2
5,707,217	+		Pf1N1B4_5129	0.57	-0.9
5,707,354	+				-1.6
5,707,354	+		Pf1N1B4_5129	0.66	+0.7
5,707,354	+		Pf1N1B4_5129	0.66	+0.1
5,707,355	-		Pf1N1B4_5129	0.66	-0.2
5,707,355	-				-0.6
5,707,554	+		Pf1N1B4_5129	0.81	-0.4
5,707,555	-		Pf1N1B4_5129	0.81	-2.2
5,707,555	-				-0.2
5,707,555	-		Pf1N1B4_5129	0.81	-3.6
5,707,555	-		Pf1N1B4_5129	0.81	-2.6
5,707,684	-		Pf1N1B4_5129	0.90	+1.4
5,707,723	+				+0.1
5,707,772	-				+0.8
5,707,837	+				-1.6
5,707,837	+				+1.7
5,707,837	+				+0.9
5,707,838	-				-0.6
5,707,849	-				+1.1
5,707,870	+				+0.4
5,707,889	+				-0.6
5,708,035	+				+0.0
5,708,036	-				-0.9
5,708,105	+				+0.0
5,708,232	-				-0.2
5,708,244	-				-0.6
5,708,244	-				-0.2
5,708,411	-				-1.0
5,708,512	+		Pf1N1B4_5130	0.15	+0.8
5,708,513	-		Pf1N1B4_5130	0.15	-0.1
5,708,513	-		Pf1N1B4_5130	0.15	-0.9
5,708,513	-		Pf1N1B4_5130	0.15	-1.2
5,708,605	-		Pf1N1B4_5130	0.23	+0.7
5,708,605	-		Pf1N1B4_5130	0.23	-0.3
5,708,621	-		Pf1N1B4_5130	0.25	+0.4
5,708,621	-		Pf1N1B4_5130	0.25	-0.3
5,708,737	+				+0.4