Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4214

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
4,667,049	-		Pf1N1B4_4213	0.12	-1.0
4,667,049	-		Pf1N1B4_4213	0.12	+1.0
4,667,094	+		Pf1N1B4_4213	0.17	-1.4
4,667,094	+		Pf1N1B4_4213	0.17	-0.4
4,667,188	-		Pf1N1B4_4213	0.28	-2.4
4,667,188	-		Pf1N1B4_4213	0.28	+1.0
4,667,194	-		Pf1N1B4_4213	0.29	+1.0
4,667,197	+		Pf1N1B4_4213	0.29	-0.4
4,667,198	-		Pf1N1B4_4213	0.29	-1.5
4,667,198	-		Pf1N1B4_4213	0.29	-0.5
4,667,249	+		Pf1N1B4_4213	0.35	+0.6
4,667,249	+		Pf1N1B4_4213	0.35	-1.0
4,667,251	+		Pf1N1B4_4213	0.35	-1.0
4,667,252	-		Pf1N1B4_4213	0.36	-1.4
4,667,252	-		Pf1N1B4_4213	0.36	+0.0
4,667,252	-		Pf1N1B4_4213	0.36	+1.4
4,667,252	-		Pf1N1B4_4213	0.36	+0.6
4,667,252	-		Pf1N1B4_4213	0.36	+1.0
4,667,261	+		Pf1N1B4_4213	0.37	-0.1
4,667,433	+		Pf1N1B4_4213	0.56	+1.5
4,667,434	-		Pf1N1B4_4213	0.56	-1.4
4,667,436	-		Pf1N1B4_4213	0.57	-0.9
4,667,475	+		Pf1N1B4_4213	0.61	+0.7
4,667,499	-				-0.4
4,667,653	-		Pf1N1B4_4213	0.81	-2.4
4,667,653	-		Pf1N1B4_4213	0.81	+0.2
4,667,696	+		Pf1N1B4_4213	0.86	+1.3
4,667,696	+		Pf1N1B4_4213	0.86	+0.3
4,667,757	+				+1.6
4,667,757	+				-0.4
4,667,758	-				-0.2
4,667,945	+				-0.2
4,667,945	+				-0.4
4,667,974	+				-2.0
4,667,974	+				-1.7
4,667,975	-				-0.4
4,667,975	-				-0.8
4,667,975	-				+0.1
4,667,975	-				+0.4
4,667,975	-				+0.8
4,667,975	-				-1.7
4,667,975	-				-0.1
4,667,975	-				-1.0
4,667,975	-				+0.6
4,668,072	-		Pf1N1B4_4214	0.10	-2.0
4,668,113	+		Pf1N1B4_4214	0.13	+0.1
4,668,124	+		Pf1N1B4_4214	0.14	-0.1
4,668,132	-				+1.0
4,668,191	+		Pf1N1B4_4214	0.18	+1.8
4,668,192	-				+0.6
4,668,273	-		Pf1N1B4_4214	0.24	+0.4
4,668,273	-		Pf1N1B4_4214	0.24	-1.5
4,668,273	-		Pf1N1B4_4214	0.24	-0.1
4,668,283	+		Pf1N1B4_4214	0.25	+0.9
4,668,284	-		Pf1N1B4_4214	0.25	+1.6
4,668,284	-		Pf1N1B4_4214	0.25	+0.6
4,668,284	-		Pf1N1B4_4214	0.25	+0.9
4,668,284	-		Pf1N1B4_4214	0.25	-0.4
4,668,288	-		Pf1N1B4_4214	0.25	+0.9
4,668,288	-		Pf1N1B4_4214	0.25	+0.6
4,668,288	-		Pf1N1B4_4214	0.25	+1.6
4,668,313	-		Pf1N1B4_4214	0.27	-0.4
4,668,350	-		Pf1N1B4_4214	0.29	-0.4
4,668,620	-		Pf1N1B4_4214	0.48	+0.4
4,668,620	-		Pf1N1B4_4214	0.48	+1.4
4,668,718	-				+1.6
4,668,891	+		Pf1N1B4_4214	0.66	+0.2
4,669,127	+		Pf1N1B4_4214	0.82	+2.1
4,669,128	-		Pf1N1B4_4214	0.82	-1.8
4,669,249	-				-0.0
4,669,249	-				+1.9
4,669,332	+				+0.6
4,669,333	-				-1.0
4,669,684	+				+0.6
4,669,685	-				+0.3
4,669,697	+				+0.6
4,669,698	-				-2.8
4,669,698	-				-0.7
4,669,699	+				+0.6
4,670,185	+		Pf1N1B4_4215	0.21	+0.6