Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_397

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
465,113	+				+0.3
465,113	+				-0.8
465,113	+				-1.1
465,113	+				+0.5
465,113	+				-0.7
465,113	+				+0.9
465,114	-				-1.1
465,114	-				-0.9
465,114	-				-0.1
465,114	-				+0.1
465,114	-				-0.1
465,114	-				-1.1
465,114	-				-0.3
465,143	+				-0.7
465,144	-				+0.5
465,144	-				+1.2
465,144	-				+0.9
465,180	-				-0.3
465,266	+		Pf1N1B4_396	0.11	+0.7
465,266	+		Pf1N1B4_396	0.11	-0.9
465,266	+		Pf1N1B4_396	0.11	-0.7
465,267	-		Pf1N1B4_396	0.11	-1.2
465,267	-		Pf1N1B4_396	0.11	-1.0
465,393	-		Pf1N1B4_396	0.27	-0.1
465,393	-		Pf1N1B4_396	0.27	-0.7
465,486	-		Pf1N1B4_396	0.38	+0.2
465,617	+		Pf1N1B4_396	0.55	-0.0
465,618	-		Pf1N1B4_396	0.55	-0.1
465,767	+		Pf1N1B4_396	0.73	+0.1
465,794	+		Pf1N1B4_396	0.77	-1.3
465,794	+		Pf1N1B4_396	0.77	-0.1
465,795	-		Pf1N1B4_396	0.77	+0.9
465,835	-		Pf1N1B4_396	0.82	+0.9
466,021	-				+1.5
466,021	-				+1.9
466,044	-				+0.6
466,054	-				-0.4
466,082	+				-1.4
466,083	-				-1.7
466,116	+				+0.5
466,116	+				-0.3
466,117	-				-0.8
466,117	-				+0.3
466,117	-				-0.9
466,117	-				-0.7
466,117	-				-0.7
466,117	-				+1.2
466,118	+				-0.7
466,118	+				+0.0
466,118	+				+0.0
466,118	+				-0.4
466,118	+				-1.4
466,119	-				-0.7
466,119	-				-0.9
466,119	-				+1.2
466,119	-				+0.9
466,119	-				+0.1
466,119	-				+0.2
466,119	-				-1.7
466,119	-				+0.4
466,119	-				-0.1
466,119	-				+1.3
466,119	-				-0.1
466,119	-				-2.7
466,119	-				-1.7
466,119	-				-1.7
466,119	-				+0.5
466,119	-				-1.1
466,119	-				-3.2
466,119	-				-2.3
466,119	-				-0.4
466,119	-				-1.4
466,119	-				-1.8
466,119	-				+0.3
466,123	-				-0.1
466,179	+		Pf1N1B4_397	0.10	-0.1
466,541	+		Pf1N1B4_397	0.38	+0.1
466,542	-		Pf1N1B4_397	0.38	+0.4
466,542	-		Pf1N1B4_397	0.38	-1.6
466,601	+		Pf1N1B4_397	0.43	-1.4
466,601	+		Pf1N1B4_397	0.43	+0.9
466,602	-		Pf1N1B4_397	0.43	-0.4
466,659	+		Pf1N1B4_397	0.47	-2.6
466,660	-		Pf1N1B4_397	0.47	+0.5
466,904	+		Pf1N1B4_397	0.66	-0.1
466,904	+		Pf1N1B4_397	0.66	-0.7
466,904	+		Pf1N1B4_397	0.66	+0.9
466,904	+		Pf1N1B4_397	0.66	+1.6
466,905	-		Pf1N1B4_397	0.66	+0.9
466,905	-		Pf1N1B4_397	0.66	-1.6
466,974	-		Pf1N1B4_397	0.71	+0.4
467,085	+				-1.1
467,087	+		Pf1N1B4_397	0.80	+1.7
467,087	+		Pf1N1B4_397	0.80	-0.7
467,088	-		Pf1N1B4_397	0.80	-0.5
467,252	+				+0.3
467,252	+				-0.1
467,252	+				-0.7
467,252	+				-0.5
467,253	-				+0.3
467,368	+				+0.6
467,368	+				+0.5
467,368	+				+0.3
467,368	+				+1.9
467,368	+				+0.7
467,368	+				+0.1
467,369	-				-0.7
467,369	-				-3.1
467,369	-				-0.3
467,369	-				+0.3
467,369	-				+1.1
467,369	-				+0.9
467,369	-				-0.1
467,374	+				-0.6
467,374	+				-1.4
467,375	-				-1.1
467,375	-				-0.3
467,631	+				-1.6
467,631	+				+0.1
467,632	-				-0.4
467,632	-				-0.9
467,632	-				+1.8
467,722	-		Pf1N1B4_398	0.15	-0.7
467,748	+		Pf1N1B4_398	0.17	-0.0
467,748	+		Pf1N1B4_398	0.17	-0.5
467,748	+		Pf1N1B4_398	0.17	-0.3
467,748	+		Pf1N1B4_398	0.17	-0.4
467,749	-		Pf1N1B4_398	0.17	-1.7
467,749	-		Pf1N1B4_398	0.17	+0.5
467,865	+		Pf1N1B4_398	0.28	+0.6
467,866	-		Pf1N1B4_398	0.28	-0.1
467,866	-		Pf1N1B4_398	0.28	+1.7
467,946	+		Pf1N1B4_398	0.35	-0.4
467,946	+		Pf1N1B4_398	0.35	-0.1
467,946	+		Pf1N1B4_398	0.35	-0.1
467,947	-		Pf1N1B4_398	0.35	-0.5
468,091	-		Pf1N1B4_398	0.47	-0.3
468,130	+		Pf1N1B4_398	0.51	-1.4
468,348	+		Pf1N1B4_398	0.70	-1.1
468,349	-		Pf1N1B4_398	0.70	-1.1
468,349	-		Pf1N1B4_398	0.70	+0.3