Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3789

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
4,196,228	+				-2.6
4,196,228	+				-0.7
4,196,228	+				-0.4
4,196,228	+				+0.1
4,196,228	+				-2.3
4,196,228	+				-0.7
4,196,228	+				-1.2
4,196,229	-				-0.5
4,196,238	+				+1.4
4,196,335	+		Pf1N1B4_3787	0.39	+1.5
4,196,335	+		Pf1N1B4_3787	0.39	+0.3
4,196,336	-		Pf1N1B4_3787	0.39	+1.8
4,196,336	-		Pf1N1B4_3787	0.39	-0.4
4,196,336	-		Pf1N1B4_3787	0.39	+0.9
4,196,336	-		Pf1N1B4_3787	0.39	+0.8
4,196,377	-		Pf1N1B4_3787	0.60	-1.3
4,196,377	-		Pf1N1B4_3787	0.60	-0.2
4,196,571	+				-0.2
4,196,571	+				-0.3
4,196,572	-				+0.1
4,196,705	+				+0.3
4,196,718	+				-0.2
4,196,718	+				-0.6
4,196,718	+				+0.4
4,196,719	-				-0.4
4,196,719	-				-0.4
4,196,719	-				-0.7
4,196,719	-				-0.7
4,196,724	+				+0.3
4,196,724	+				+0.8
4,196,724	+				-1.7
4,196,725	-				-0.2
4,196,725	-				-2.0
4,196,725	-				-0.2
4,196,725	-				-2.3
4,196,725	-				-1.0
4,196,977	+				-0.1
4,196,977	+				+1.8
4,196,978	-				+0.8
4,196,978	-				-2.2
4,196,994	-				-1.3
4,196,994	-				+0.5
4,197,036	+				+1.4
4,197,037	-				-0.2
4,197,037	-				-0.5
4,197,099	+				-1.7
4,197,099	+				+0.1
4,197,100	-				+0.4
4,197,100	-				-0.2
4,197,100	-				-1.2
4,197,100	-				+0.5
4,197,100	-				-0.2
4,197,100	-				+0.4
4,197,182	-				+0.6
4,197,182	-				-0.7
4,197,304	+		Pf1N1B4_3789	0.28	-2.0
4,197,304	+		Pf1N1B4_3789	0.28	-1.7
4,197,305	-		Pf1N1B4_3789	0.28	+0.8
4,197,430	+		Pf1N1B4_3789	0.65	-1.0
4,197,430	+		Pf1N1B4_3789	0.65	-0.5
4,197,431	-		Pf1N1B4_3789	0.65	+0.5
4,197,439	+		Pf1N1B4_3789	0.68	-1.3
4,197,439	+		Pf1N1B4_3789	0.68	+0.4
4,197,530	+				+0.8
4,197,553	+				+1.4
4,198,021	+				+1.2
4,198,021	+				+0.2
4,198,022	-				+1.0
4,198,022	-				+0.3
4,198,036	+				-2.7
4,198,036	+				-2.7
4,198,036	+				+0.1
4,198,036	+				-1.2
4,198,036	+				-0.0
4,198,036	+				-1.7
4,198,037	-				+1.8
4,198,037	-				-1.2
4,198,037	-				-0.6
4,198,037	-				-0.4
4,198,037	-				+0.2
4,198,142	+				-0.8
4,198,142	+				+0.1
4,198,174	+		Pf1N1B4_3790	0.12	-0.5
4,198,174	+		Pf1N1B4_3790	0.12	-1.0
4,198,174	+		Pf1N1B4_3790	0.12	-2.8
4,198,174	+		Pf1N1B4_3790	0.12	-1.1
4,198,230	+		Pf1N1B4_3790	0.16	+1.8
4,198,420	+		Pf1N1B4_3790	0.29	+0.2
4,198,420	+		Pf1N1B4_3790	0.29	-0.3
4,198,420	+		Pf1N1B4_3790	0.29	-0.2
4,198,420	+				+0.8
4,198,420	+		Pf1N1B4_3790	0.29	-1.2
4,198,448	+		Pf1N1B4_3790	0.31	+0.2
4,198,468	+		Pf1N1B4_3790	0.33	+1.2
4,198,468	+		Pf1N1B4_3790	0.33	+0.8
4,198,468	+		Pf1N1B4_3790	0.33	+0.7
4,198,468	+		Pf1N1B4_3790	0.33	-1.6
4,198,468	+		Pf1N1B4_3790	0.33	+0.0
4,198,468	+				+2.4
4,198,469	-		Pf1N1B4_3790	0.33	+1.5
4,198,471	+		Pf1N1B4_3790	0.33	-1.2
4,198,471	+		Pf1N1B4_3790	0.33	+0.8
4,198,472	-		Pf1N1B4_3790	0.33	+0.8
4,198,472	-		Pf1N1B4_3790	0.33	+0.2
4,198,472	-		Pf1N1B4_3790	0.33	+0.3
4,198,472	-		Pf1N1B4_3790	0.33	-0.5
4,198,513	+				+0.2
4,198,513	+		Pf1N1B4_3790	0.36	-0.8
4,198,513	+		Pf1N1B4_3790	0.36	+0.5
4,198,513	+		Pf1N1B4_3790	0.36	+1.8
4,198,513	+		Pf1N1B4_3790	0.36	+0.2
4,198,514	-		Pf1N1B4_3790	0.36	-1.5
4,198,514	-		Pf1N1B4_3790	0.36	+0.4