Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3455

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
3,852,239	+		Pf1N1B4_3454	0.52	-0.9
3,852,240	-		Pf1N1B4_3454	0.52	-0.6
3,852,240	-		Pf1N1B4_3454	0.52	-1.4
3,852,266	+		Pf1N1B4_3454	0.53	-0.6
3,852,640	+		Pf1N1B4_3454	0.79	+0.4
3,852,640	+		Pf1N1B4_3454	0.79	-0.4
3,852,640	+		Pf1N1B4_3454	0.79	+0.9
3,852,640	+		Pf1N1B4_3454	0.79	-2.1
3,852,640	+		Pf1N1B4_3454	0.79	-1.6
3,852,640	+		Pf1N1B4_3454	0.79	-1.4
3,852,722	+		Pf1N1B4_3454	0.85	-2.2
3,852,731	+		Pf1N1B4_3454	0.86	-2.1
3,852,778	+		Pf1N1B4_3454	0.89	-2.1
3,852,778	+		Pf1N1B4_3454	0.89	-0.6
3,852,778	+				+0.9
3,852,778	+		Pf1N1B4_3454	0.89	-0.1
3,853,013	+				+1.7
3,853,110	-				-1.0
3,853,110	-				+0.3
3,853,110	-				+0.7
3,853,110	-				+0.9
3,853,307	-		Pf1N1B4_3455	0.52	+0.4
3,853,407	-		Pf1N1B4_3455	0.83	-2.5
3,853,438	-				-1.6
3,853,438	-				-4.5
3,853,463	-				-2.1
3,853,465	-				-2.1
3,853,520	+				-0.1
3,853,559	+				+0.9
3,853,617	+				-0.5
3,853,617	+				-0.3
3,853,618	-				+0.2
3,853,618	-				-0.4
3,853,618	-				+0.4
3,853,618	-				+1.4
3,853,618	-				+0.3
3,853,618	-				+0.7
3,853,637	+				+0.9
3,853,650	+				-0.8
3,853,650	+				-0.1
3,853,650	+				-0.6
3,853,650	+				+0.6
3,853,680	+				+0.0
3,853,680	+				-0.5
3,853,757	+				+1.1
3,853,757	+				+0.4
3,853,757	+				-0.3
3,853,757	+				+1.3
3,853,758	-				+0.9
3,853,781	+				+0.7
3,853,786	+				+0.9
3,853,786	+				+0.4
3,853,787	-				+0.9
3,853,788	+				+0.3
3,853,788	+				-1.4
3,853,788	+				-1.9
3,853,788	+				-1.4
3,853,788	+				-1.9
3,853,788	+				-1.2
3,853,788	+				+0.4
3,853,789	-				-1.1
3,853,789	-				-0.2
3,853,789	-				+1.5
3,853,789	-				+0.8
3,853,814	+				+0.4
3,853,814	+				-0.4
3,853,814	+				-0.4
3,853,815	-				-1.9
3,853,815	-				-1.4
3,853,818	-				-0.1
3,853,829	-				-1.6
3,853,863	+				+1.4
3,853,868	+				-0.3
3,853,868	+				-0.4
3,853,868	+				-0.1
3,853,868	+				+0.8
3,853,869	-				-0.3
3,853,873	-				+0.4
3,854,101	-				+0.4
3,854,188	-		Pf1N1B4_3456	0.57	+0.3
3,854,188	-				-0.1
3,854,191	-		Pf1N1B4_3456	0.58	+1.9
3,854,199	+		Pf1N1B4_3456	0.59	+1.2
3,854,239	-		Pf1N1B4_3456	0.66	+0.5
3,854,323	+		Pf1N1B4_3456	0.82	-1.3
3,854,323	+		Pf1N1B4_3456	0.82	-0.6
3,854,359	+		Pf1N1B4_3456	0.88	+0.9
3,854,360	-		Pf1N1B4_3456	0.89	+0.9
3,854,360	-		Pf1N1B4_3456	0.89	-0.1
3,854,360	-		Pf1N1B4_3456	0.89	+0.3
3,854,360	-		Pf1N1B4_3456	0.89	-0.1
3,854,364	+		Pf1N1B4_3456	0.89	-0.3
3,854,365	-		Pf1N1B4_3456	0.89	-0.2