Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3245

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
3,631,390	+		Pf1N1B4_3244	0.61	-0.6
3,631,423	+		Pf1N1B4_3244	0.63	+0.4
3,631,424	-		Pf1N1B4_3244	0.63	+1.4
3,631,424	-		Pf1N1B4_3244	0.63	-0.6
3,631,424	-		Pf1N1B4_3244	0.63	+0.3
3,631,501	+		Pf1N1B4_3244	0.67	+0.0
3,631,501	+		Pf1N1B4_3244	0.67	-2.0
3,631,501	+		Pf1N1B4_3244	0.67	-0.2
3,631,502	-		Pf1N1B4_3244	0.67	-2.1
3,631,657	+		Pf1N1B4_3244	0.75	-0.2
3,631,658	-		Pf1N1B4_3244	0.75	-1.3
3,631,658	-		Pf1N1B4_3244	0.75	+0.4
3,631,660	+		Pf1N1B4_3244	0.75	+0.8
3,631,660	+				-1.0
3,631,660	+		Pf1N1B4_3244	0.75	-0.6
3,631,660	+		Pf1N1B4_3244	0.75	+0.3
3,631,660	+		Pf1N1B4_3244	0.75	-2.2
3,631,660	+		Pf1N1B4_3244	0.75	-1.0
3,631,660	+		Pf1N1B4_3244	0.75	+0.2
3,631,661	-				+1.0
3,631,661	-		Pf1N1B4_3244	0.75	-0.6
3,631,661	-		Pf1N1B4_3244	0.75	+0.3
3,631,759	+		Pf1N1B4_3244	0.80	-1.3
3,631,759	+		Pf1N1B4_3244	0.80	-2.0
3,631,760	-		Pf1N1B4_3244	0.80	+0.6
3,631,760	-		Pf1N1B4_3244	0.80	+0.4
3,631,838	+		Pf1N1B4_3244	0.84	+1.0
3,631,839	-		Pf1N1B4_3244	0.84	-1.8
3,631,839	-		Pf1N1B4_3244	0.84	-0.1
3,631,923	+		Pf1N1B4_3244	0.88	-0.3
3,631,923	+		Pf1N1B4_3244	0.88	+1.4
3,631,923	+		Pf1N1B4_3244	0.88	-0.3
3,631,924	-		Pf1N1B4_3244	0.88	-1.1
3,631,955	-				-0.4
3,632,190	+				+0.0
3,632,190	+				+0.1
3,632,190	+				-1.3
3,632,190	+				+0.0
3,632,193	+				+0.5
3,632,193	+				+0.9
3,632,193	+				+1.6
3,632,193	+				-1.3
3,632,381	-				-1.0
3,632,522	-		Pf1N1B4_3245	0.16	-1.6
3,633,143	-		Pf1N1B4_3245	0.58	-2.1
3,633,215	-		Pf1N1B4_3245	0.63	-1.3
3,633,281	-		Pf1N1B4_3245	0.67	+1.0
3,633,281	-		Pf1N1B4_3245	0.67	-2.6
3,633,338	-		Pf1N1B4_3245	0.71	-1.3
3,633,770	-				-1.0
3,633,770	-				-0.7
3,633,770	-				-0.6
3,634,037	-				-1.0
3,634,132	-		Pf1N1B4_3246	0.12	-1.5
3,634,318	-		Pf1N1B4_3246	0.18	-2.9
3,634,442	+		Pf1N1B4_3246	0.22	-3.4
3,634,594	-		Pf1N1B4_3246	0.27	+1.0
3,634,594	-		Pf1N1B4_3246	0.27	-0.6
3,634,635	+		Pf1N1B4_3246	0.28	-1.8
3,634,636	-		Pf1N1B4_3246	0.28	-1.2
3,634,640	-				-1.3
3,634,640	-		Pf1N1B4_3246	0.28	-1.6