Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2888

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
3,242,172	+		Pf1N1B4_2887	0.70	+0.8
3,242,173	-		Pf1N1B4_2887	0.70	-0.2
3,242,304	+		Pf1N1B4_2887	0.75	+2.2
3,242,738	+				-1.6
3,242,778	+				-0.6
3,242,778	+				-0.7
3,242,778	+				-0.4
3,242,778	+				+0.2
3,242,778	+				+0.3
3,242,779	-				-0.2
3,242,779	-				-0.8
3,242,779	-				+0.0
3,242,779	-				+2.2
3,242,779	-				-0.8
3,242,779	-				-0.2
3,242,779	-				-0.3
3,242,779	-				-0.1
3,242,779	-				+2.0
3,242,779	-				-1.1
3,242,799	+				+0.2
3,242,800	-				+0.7
3,242,800	-				-0.8
3,242,826	+				-0.1
3,242,826	+				-0.1
3,243,252	-		Pf1N1B4_2888	0.34	+1.2
3,243,252	-		Pf1N1B4_2888	0.34	-1.0
3,243,359	+		Pf1N1B4_2888	0.50	+0.4
3,243,359	+		Pf1N1B4_2888	0.50	-1.4
3,243,497	-		Pf1N1B4_2888	0.69	-1.1
3,243,497	-				+0.2
3,243,528	-		Pf1N1B4_2888	0.74	-0.2
3,243,528	-		Pf1N1B4_2888	0.74	-1.2
3,243,528	-		Pf1N1B4_2888	0.74	-0.4
3,243,530	+		Pf1N1B4_2888	0.74	-1.7
3,243,531	-		Pf1N1B4_2888	0.74	+0.6
3,243,582	+		Pf1N1B4_2888	0.81	+0.3
3,243,583	-		Pf1N1B4_2888	0.82	-1.4
3,243,583	-		Pf1N1B4_2888	0.82	-1.8
3,243,697	+				+0.2
3,243,698	-				-1.4
3,243,698	-				+0.4
3,244,057	-		Pf1N1B4_2889	0.26	+0.6
3,244,062	+		Pf1N1B4_2889	0.27	+1.2
3,244,062	+		Pf1N1B4_2889	0.27	-0.9
3,244,062	+		Pf1N1B4_2889	0.27	-0.2
3,244,063	-		Pf1N1B4_2889	0.27	-0.1
3,244,441	-		Pf1N1B4_2889	0.55	+0.9
3,244,441	-		Pf1N1B4_2889	0.55	+0.2
3,244,471	-		Pf1N1B4_2889	0.57	+0.2
3,244,644	+		Pf1N1B4_2889	0.70	+0.3
3,244,645	-		Pf1N1B4_2889	0.70	-0.2
3,244,674	+		Pf1N1B4_2889	0.72	+1.2
3,244,675	-		Pf1N1B4_2889	0.72	-0.6
3,244,675	-		Pf1N1B4_2889	0.72	-0.6