Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2872

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
3,217,561	+				+0.6
3,217,561	+				-0.3
3,217,561	+				+0.1
3,217,562	-				+0.0
3,217,562	-				-1.1
3,217,562	-				-1.4
3,217,562	-				-0.1
3,217,562	-				+0.2
3,217,562	-				+0.7
3,217,562	-				-0.3
3,217,588	+				-0.5
3,217,594	+				+1.6
3,217,594	+				+0.8
3,217,594	+				+0.1
3,217,595	-				-0.6
3,217,595	-				-1.0
3,217,595	-				-0.5
3,217,628	+				-0.8
3,217,629	-				+1.8
3,217,629	-				-1.4
3,217,629	-				+0.8
3,217,629	-				-0.2
3,217,630	-				-0.4
3,217,715	-		Pf1N1B4_2870	0.40	-0.8
3,217,715	-		Pf1N1B4_2870	0.40	-0.3
3,217,715	-		Pf1N1B4_2870	0.40	+1.2
3,217,929	+				+1.0
3,217,940	-				+0.7
3,217,984	-				+1.8
3,217,997	+				-0.6
3,217,998	-				-0.9
3,217,998	-				+0.8
3,218,052	+				+1.5
3,218,097	-				+0.5
3,218,188	+		Pf1N1B4_2871	0.23	-0.4
3,218,188	+		Pf1N1B4_2871	0.23	-0.4
3,218,189	-		Pf1N1B4_2871	0.23	+0.5
3,218,189	-		Pf1N1B4_2871	0.23	-0.3
3,218,278	+		Pf1N1B4_2871	0.49	-0.3
3,218,278	+		Pf1N1B4_2871	0.49	+0.4
3,218,279	-		Pf1N1B4_2871	0.49	+0.3
3,218,279	-		Pf1N1B4_2871	0.49	-0.0
3,218,279	-		Pf1N1B4_2871	0.49	+1.1
3,218,279	-		Pf1N1B4_2871	0.49	+1.6
3,218,279	-		Pf1N1B4_2871	0.49	-1.6
3,218,358	-		Pf1N1B4_2871	0.72	+1.2
3,218,358	-		Pf1N1B4_2871	0.72	+0.9
3,218,384	+		Pf1N1B4_2871	0.80	-1.4
3,218,419	+				+0.7
3,218,420	-				-0.8
3,218,538	+				-0.2
3,218,538	+				-0.4
3,218,546	+				-1.2
3,218,546	+				+1.5
3,218,709	+		Pf1N1B4_2872	0.11	-2.1
3,218,709	+		Pf1N1B4_2872	0.11	-1.2
3,218,709	+		Pf1N1B4_2872	0.11	-1.7
3,218,709	+		Pf1N1B4_2872	0.11	-1.6
3,218,710	-		Pf1N1B4_2872	0.11	-0.0
3,218,710	-		Pf1N1B4_2872	0.11	-1.4
3,218,710	-		Pf1N1B4_2872	0.11	-0.4
3,218,710	-		Pf1N1B4_2872	0.11	-1.7
3,218,710	-		Pf1N1B4_2872	0.11	-3.6
3,218,710	-		Pf1N1B4_2872	0.11	-0.7
3,218,710	-		Pf1N1B4_2872	0.11	-0.8
3,218,710	-		Pf1N1B4_2872	0.11	-2.5
3,218,840	+		Pf1N1B4_2872	0.19	+1.6
3,218,841	-		Pf1N1B4_2872	0.19	-0.1
3,218,841	-		Pf1N1B4_2872	0.19	-0.3
3,218,841	-		Pf1N1B4_2872	0.19	+0.6
3,218,841	-		Pf1N1B4_2872	0.19	+1.2
3,218,841	-		Pf1N1B4_2872	0.19	-0.0
3,218,841	-		Pf1N1B4_2872	0.19	-0.8
3,218,909	+		Pf1N1B4_2872	0.23	-0.8
3,218,909	+		Pf1N1B4_2872	0.23	-0.4
3,218,909	+		Pf1N1B4_2872	0.23	+0.2
3,218,910	-		Pf1N1B4_2872	0.23	+0.6
3,218,910	-		Pf1N1B4_2872	0.23	-0.0
3,218,910	-		Pf1N1B4_2872	0.23	-0.8
3,218,910	-				-0.1
3,218,935	-		Pf1N1B4_2872	0.25	-0.3
3,218,936	+		Pf1N1B4_2872	0.25	-0.2
3,218,936	+		Pf1N1B4_2872	0.25	+0.5
3,218,936	+		Pf1N1B4_2872	0.25	-0.4
3,218,936	+		Pf1N1B4_2872	0.25	+1.8
3,218,936	+		Pf1N1B4_2872	0.25	-1.1
3,218,936	+				+1.2
3,218,936	+		Pf1N1B4_2872	0.25	-0.7
3,218,936	+		Pf1N1B4_2872	0.25	+0.5
3,218,936	+		Pf1N1B4_2872	0.25	-2.3
3,218,937	-		Pf1N1B4_2872	0.25	+1.2
3,218,937	-				+0.6
3,218,937	-		Pf1N1B4_2872	0.25	-1.0
3,218,941	-		Pf1N1B4_2872	0.25	-1.6
3,218,941	-		Pf1N1B4_2872	0.25	+2.2
3,218,982	+		Pf1N1B4_2872	0.28	+0.3
3,218,982	+		Pf1N1B4_2872	0.28	-0.1
3,218,982	+		Pf1N1B4_2872	0.28	-1.3
3,218,982	+		Pf1N1B4_2872	0.28	-0.2
3,218,982	+		Pf1N1B4_2872	0.28	+0.2
3,218,982	+		Pf1N1B4_2872	0.28	-0.2
3,218,982	+		Pf1N1B4_2872	0.28	+0.2
3,218,982	+		Pf1N1B4_2872	0.28	-0.5
3,218,982	+		Pf1N1B4_2872	0.28	+0.2
3,218,983	-		Pf1N1B4_2872	0.28	-2.0
3,218,983	-		Pf1N1B4_2872	0.28	-1.1
3,218,983	-		Pf1N1B4_2872	0.28	+0.2
3,218,983	-		Pf1N1B4_2872	0.28	+0.4
3,218,983	-		Pf1N1B4_2872	0.28	-1.3
3,218,983	-		Pf1N1B4_2872	0.28	-0.7
3,218,983	-		Pf1N1B4_2872	0.28	-1.6
3,218,983	-		Pf1N1B4_2872	0.28	-0.8
3,218,983	-		Pf1N1B4_2872	0.28	-0.6
3,218,983	-		Pf1N1B4_2872	0.28	-2.8
3,218,983	-		Pf1N1B4_2872	0.28	-1.3
3,218,983	-		Pf1N1B4_2872	0.28	-1.4
3,218,983	-		Pf1N1B4_2872	0.28	-2.0
3,218,983	-		Pf1N1B4_2872	0.28	+1.2
3,218,983	-		Pf1N1B4_2872	0.28	+0.2
3,219,113	+		Pf1N1B4_2872	0.36	-1.3
3,219,113	+		Pf1N1B4_2872	0.36	-1.1
3,219,113	+		Pf1N1B4_2872	0.36	-0.8
3,219,113	+		Pf1N1B4_2872	0.36	-1.1
3,219,113	+		Pf1N1B4_2872	0.36	-1.4
3,219,113	+		Pf1N1B4_2872	0.36	-1.4
3,219,114	-		Pf1N1B4_2872	0.37	-1.0
3,219,114	-		Pf1N1B4_2872	0.37	-3.3
3,219,114	-		Pf1N1B4_2872	0.37	-2.0
3,219,114	-		Pf1N1B4_2872	0.37	-1.3
3,219,114	-		Pf1N1B4_2872	0.37	-1.9
3,219,114	-		Pf1N1B4_2872	0.37	-1.1
3,219,114	-		Pf1N1B4_2872	0.37	-1.9
3,219,114	-		Pf1N1B4_2872	0.37	-1.3
3,219,114	-		Pf1N1B4_2872	0.37	-2.3
3,219,114	-		Pf1N1B4_2872	0.37	-1.8
3,219,134	+		Pf1N1B4_2872	0.38	+0.5
3,219,160	-		Pf1N1B4_2872	0.39	+0.5
3,219,239	+		Pf1N1B4_2872	0.45	-2.4
3,219,266	+		Pf1N1B4_2872	0.46	-1.2
3,219,492	+		Pf1N1B4_2872	0.61	+0.1
3,219,870	-		Pf1N1B4_2872	0.85	-0.8
3,219,870	-		Pf1N1B4_2872	0.85	-1.5
3,219,981	+				-1.1
3,220,206	+		Pf1N1B4_2873	0.73	-1.6
3,220,206	+		Pf1N1B4_2873	0.73	-0.9
3,220,206	+		Pf1N1B4_2873	0.73	+0.2
3,220,206	+		Pf1N1B4_2873	0.73	-1.1
3,220,206	+		Pf1N1B4_2873	0.73	+0.2
3,220,208	+		Pf1N1B4_2873	0.75	+0.2
3,220,209	-		Pf1N1B4_2873	0.76	-1.1
3,220,795	-		Pf1N1B4_2874	0.23	+0.3
3,220,840	-		Pf1N1B4_2874	0.25	-0.8
3,221,010	+		Pf1N1B4_2874	0.33	-0.8