Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2556

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
2,897,285	+		Pf1N1B4_2554	0.83	-0.7
2,897,285	+		Pf1N1B4_2554	0.83	-3.2
2,897,285	+		Pf1N1B4_2554	0.83	+1.3
2,897,285	+		Pf1N1B4_2554	0.83	-0.3
2,897,285	+		Pf1N1B4_2554	0.83	-0.3
2,897,285	+		Pf1N1B4_2554	0.83	-0.0
2,897,285	+		Pf1N1B4_2554	0.83	-2.0
2,897,286	-		Pf1N1B4_2554	0.84	-0.8
2,897,286	-		Pf1N1B4_2554	0.84	+0.3
2,897,286	-		Pf1N1B4_2554	0.84	-0.7
2,897,286	-		Pf1N1B4_2554	0.84	-2.5
2,897,317	-				-0.4
2,897,317	-				-0.0
2,897,334	+				-1.3
2,897,377	-				+0.4
2,897,387	+				+2.1
2,897,436	+				+1.8
2,897,437	-				+0.5
2,897,437	-				+1.0
2,897,437	-				+1.3
2,897,437	-				-0.6
2,897,533	+		Pf1N1B4_2555	0.14	+1.1
2,897,533	+				+1.3
2,897,534	-		Pf1N1B4_2555	0.14	+0.3
2,897,534	-		Pf1N1B4_2555	0.14	-1.3
2,897,568	+		Pf1N1B4_2555	0.18	+0.3
2,897,568	+		Pf1N1B4_2555	0.18	+1.0
2,897,568	+		Pf1N1B4_2555	0.18	-0.7
2,897,568	+		Pf1N1B4_2555	0.18	-1.0
2,897,568	+		Pf1N1B4_2555	0.18	-0.1
2,897,569	-		Pf1N1B4_2555	0.18	-1.9
2,897,569	-		Pf1N1B4_2555	0.18	+1.3
2,897,569	-		Pf1N1B4_2555	0.18	-0.7
2,897,569	-		Pf1N1B4_2555	0.18	-0.4
2,897,569	-		Pf1N1B4_2555	0.18	-0.3
2,897,739	+		Pf1N1B4_2555	0.39	-0.6
2,897,739	+		Pf1N1B4_2555	0.39	-1.5
2,897,739	+		Pf1N1B4_2555	0.39	-0.3
2,897,739	+		Pf1N1B4_2555	0.39	-1.9
2,897,740	-		Pf1N1B4_2555	0.40	+0.6
2,897,740	-		Pf1N1B4_2555	0.40	-1.0
2,897,755	-				+1.3
2,897,757	+		Pf1N1B4_2555	0.42	+0.3
2,897,757	+		Pf1N1B4_2555	0.42	-0.7
2,897,757	+		Pf1N1B4_2555	0.42	-0.9
2,897,757	+		Pf1N1B4_2555	0.42	-0.4
2,897,757	+		Pf1N1B4_2555	0.42	-0.9
2,897,757	+		Pf1N1B4_2555	0.42	-0.9
2,897,758	-		Pf1N1B4_2555	0.42	-1.5
2,897,758	-		Pf1N1B4_2555	0.42	-1.5
2,897,758	-		Pf1N1B4_2555	0.42	+0.8
2,897,758	-		Pf1N1B4_2555	0.42	+0.4
2,897,758	-		Pf1N1B4_2555	0.42	-1.3
2,897,758	-		Pf1N1B4_2555	0.42	+0.3
2,897,758	-		Pf1N1B4_2555	0.42	+0.4
2,897,758	-		Pf1N1B4_2555	0.42	-0.0
2,897,758	-		Pf1N1B4_2555	0.42	+0.7
2,897,758	-		Pf1N1B4_2555	0.42	-0.5
2,897,758	-		Pf1N1B4_2555	0.42	-0.8
2,898,292	+				+0.3
2,898,292	+				-0.3
2,898,293	-				-0.3
2,898,293	-				-3.2
2,898,401	+		Pf1N1B4_2556	0.13	-0.5
2,898,401	+		Pf1N1B4_2556	0.13	+1.0
2,898,401	+		Pf1N1B4_2556	0.13	+0.3
2,898,401	+		Pf1N1B4_2556	0.13	+0.6
2,898,401	+		Pf1N1B4_2556	0.13	+1.7
2,898,401	+		Pf1N1B4_2556	0.13	-1.0
2,898,401	+		Pf1N1B4_2556	0.13	-0.0
2,898,402	-		Pf1N1B4_2556	0.13	-0.4
2,898,402	-		Pf1N1B4_2556	0.13	-0.3
2,898,402	-		Pf1N1B4_2556	0.13	-0.3
2,898,402	-		Pf1N1B4_2556	0.13	-0.3
2,898,525	+		Pf1N1B4_2556	0.26	+0.8
2,898,583	+		Pf1N1B4_2556	0.32	+1.0
2,898,584	-		Pf1N1B4_2556	0.32	-1.5
2,898,586	+		Pf1N1B4_2556	0.32	-1.6
2,898,586	+		Pf1N1B4_2556	0.32	+0.1
2,898,586	+				+1.3
2,898,586	+		Pf1N1B4_2556	0.32	+0.3
2,898,586	+		Pf1N1B4_2556	0.32	-0.1
2,898,586	+		Pf1N1B4_2556	0.32	+0.6
2,898,587	-		Pf1N1B4_2556	0.32	-0.0
2,898,587	-		Pf1N1B4_2556	0.32	-0.5
2,898,762	+		Pf1N1B4_2556	0.50	-1.3
2,898,935	+		Pf1N1B4_2556	0.68	+1.8
2,898,935	+		Pf1N1B4_2556	0.68	+0.8
2,898,935	+		Pf1N1B4_2556	0.68	+0.8
2,898,936	-		Pf1N1B4_2556	0.68	-0.6
2,898,936	-		Pf1N1B4_2556	0.68	+2.1
2,899,030	+		Pf1N1B4_2556	0.77	-0.4
2,899,030	+		Pf1N1B4_2556	0.77	-0.2
2,899,070	+		Pf1N1B4_2556	0.81	+0.9
2,899,070	+		Pf1N1B4_2556	0.81	-1.0
2,899,070	+		Pf1N1B4_2556	0.81	-1.7
2,899,070	+		Pf1N1B4_2556	0.81	-2.3
2,899,070	+		Pf1N1B4_2556	0.81	+1.5
2,899,070	+		Pf1N1B4_2556	0.81	-0.4
2,899,071	-				+0.3
2,899,071	-		Pf1N1B4_2556	0.81	-0.6
2,899,071	-		Pf1N1B4_2556	0.81	-1.7
2,899,071	-		Pf1N1B4_2556	0.81	+1.0
2,899,282	-				-1.0
2,899,282	-				-2.3
2,899,284	+				+0.9
2,899,284	+				+0.5
2,899,284	+				-1.5
2,899,295	-				+1.0
2,899,309	+				-1.7
2,899,309	+				+0.3
2,899,309	+				+1.7
2,899,309	+				-1.9
2,899,310	-				-0.5
2,899,587	-		Pf1N1B4_2557	0.27	-1.5
2,899,607	-		Pf1N1B4_2557	0.29	+0.6
2,899,648	+		Pf1N1B4_2557	0.34	-0.4
2,899,649	-		Pf1N1B4_2557	0.34	+0.3
2,899,649	-		Pf1N1B4_2557	0.34	-1.7
2,899,650	+		Pf1N1B4_2557	0.34	+0.8
2,899,650	+		Pf1N1B4_2557	0.34	-0.6
2,899,650	+		Pf1N1B4_2557	0.34	+0.3
2,899,650	+		Pf1N1B4_2557	0.34	-1.2
2,899,651	-		Pf1N1B4_2557	0.34	-1.1
2,899,651	-		Pf1N1B4_2557	0.34	+0.1
2,899,941	+		Pf1N1B4_2557	0.64	-0.9
2,899,941	+		Pf1N1B4_2557	0.64	-0.3
2,899,941	+		Pf1N1B4_2557	0.64	-1.9
2,900,000	+		Pf1N1B4_2557	0.70	+0.1
2,900,076	+		Pf1N1B4_2557	0.78	+0.1
2,900,076	+				-0.3
2,900,180	+		Pf1N1B4_2557	0.89	-0.8
2,900,224	+				+0.7
2,900,225	-				+2.9
2,900,243	+				+0.8
2,900,244	-				+0.6
2,900,244	-				-1.3