Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2541

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
2,882,517	+		Pf1N1B4_2540	0.21	+1.1
2,882,665	+		Pf1N1B4_2540	0.33	+1.0
2,882,665	+		Pf1N1B4_2540	0.33	-0.4
2,882,665	+		Pf1N1B4_2540	0.33	+0.2
2,882,665	+		Pf1N1B4_2540	0.33	-0.6
2,882,665	+		Pf1N1B4_2540	0.33	-1.2
2,882,665	+		Pf1N1B4_2540	0.33	+0.3
2,882,665	+		Pf1N1B4_2540	0.33	-0.3
2,882,665	+		Pf1N1B4_2540	0.33	+0.4
2,882,665	+		Pf1N1B4_2540	0.33	-0.2
2,882,665	+		Pf1N1B4_2540	0.33	-0.4
2,882,665	+		Pf1N1B4_2540	0.33	+0.4
2,882,665	+		Pf1N1B4_2540	0.33	-0.3
2,882,665	+		Pf1N1B4_2540	0.33	+0.1
2,882,666	-		Pf1N1B4_2540	0.33	+0.2
2,882,666	-		Pf1N1B4_2540	0.33	+0.6
2,882,666	-		Pf1N1B4_2540	0.33	+0.3
2,882,666	-				-0.7
2,882,668	-		Pf1N1B4_2540	0.33	-1.9
2,882,668	-		Pf1N1B4_2540	0.33	-2.2
2,882,713	+		Pf1N1B4_2540	0.37	+0.3
2,882,742	+				+0.7
2,882,742	+		Pf1N1B4_2540	0.39	-0.3
2,882,755	+		Pf1N1B4_2540	0.40	-0.3
2,882,755	+		Pf1N1B4_2540	0.40	+0.9
2,882,755	+		Pf1N1B4_2540	0.40	-1.3
2,882,755	+		Pf1N1B4_2540	0.40	-0.3
2,882,755	+		Pf1N1B4_2540	0.40	-0.3
2,882,756	-		Pf1N1B4_2540	0.40	+0.1
2,882,758	+		Pf1N1B4_2540	0.40	-0.7
2,882,759	-		Pf1N1B4_2540	0.40	+1.1
2,882,833	+		Pf1N1B4_2540	0.46	+0.1
2,882,833	+		Pf1N1B4_2540	0.46	+0.5
2,882,833	+		Pf1N1B4_2540	0.46	-0.6
2,882,834	-		Pf1N1B4_2540	0.46	-0.0
2,882,915	-		Pf1N1B4_2540	0.53	-0.5
2,883,075	+		Pf1N1B4_2540	0.66	+1.7
2,883,112	+		Pf1N1B4_2540	0.69	+0.0
2,883,113	-		Pf1N1B4_2540	0.69	+0.0
2,883,160	+		Pf1N1B4_2540	0.72	+0.7
2,883,160	+		Pf1N1B4_2540	0.72	-0.1
2,883,160	+		Pf1N1B4_2540	0.72	-0.9
2,883,160	+		Pf1N1B4_2540	0.72	-0.7
2,883,160	+		Pf1N1B4_2540	0.72	-1.8
2,883,160	+		Pf1N1B4_2540	0.72	+0.1
2,883,161	-		Pf1N1B4_2540	0.72	-0.6
2,883,161	-		Pf1N1B4_2540	0.72	-0.3
2,883,190	+		Pf1N1B4_2540	0.75	-1.5
2,883,190	+		Pf1N1B4_2540	0.75	-2.0
2,883,190	+		Pf1N1B4_2540	0.75	-0.2
2,883,190	+		Pf1N1B4_2540	0.75	-0.5
2,883,190	+		Pf1N1B4_2540	0.75	-2.0
2,883,190	+		Pf1N1B4_2540	0.75	-0.2
2,883,191	-		Pf1N1B4_2540	0.75	-0.0
2,883,191	-		Pf1N1B4_2540	0.75	+0.1
2,883,247	+		Pf1N1B4_2540	0.79	-1.7
2,883,247	+				-0.7
2,883,248	-		Pf1N1B4_2540	0.79	-2.3
2,883,262	+		Pf1N1B4_2540	0.81	-1.2
2,883,262	+		Pf1N1B4_2540	0.81	-2.0
2,883,262	+		Pf1N1B4_2540	0.81	-0.4
2,883,262	+		Pf1N1B4_2540	0.81	-0.1
2,883,313	+		Pf1N1B4_2540	0.85	-0.3
2,883,316	+		Pf1N1B4_2540	0.85	+0.5
2,883,316	+		Pf1N1B4_2540	0.85	-0.1
2,883,316	+		Pf1N1B4_2540	0.85	-0.5
2,883,316	+		Pf1N1B4_2540	0.85	+1.7
2,883,316	+		Pf1N1B4_2540	0.85	+0.3
2,883,316	+		Pf1N1B4_2540	0.85	-1.6
2,883,316	+		Pf1N1B4_2540	0.85	+1.5
2,883,316	+		Pf1N1B4_2540	0.85	-0.3
2,883,316	+		Pf1N1B4_2540	0.85	-1.0
2,883,316	+		Pf1N1B4_2540	0.85	+1.3
2,883,316	+		Pf1N1B4_2540	0.85	+0.1
2,883,317	-		Pf1N1B4_2540	0.85	-1.7
2,883,317	-		Pf1N1B4_2540	0.85	+0.3
2,883,317	-		Pf1N1B4_2540	0.85	-1.3
2,883,317	-		Pf1N1B4_2540	0.85	-1.9
2,883,317	-		Pf1N1B4_2540	0.85	+1.1
2,883,317	-		Pf1N1B4_2540	0.85	+0.3
2,883,317	-		Pf1N1B4_2540	0.85	-1.3
2,883,317	-		Pf1N1B4_2540	0.85	-0.7
2,883,364	+		Pf1N1B4_2540	0.89	-0.9
2,883,364	+		Pf1N1B4_2540	0.89	-1.3
2,883,364	+		Pf1N1B4_2540	0.89	-1.0
2,883,364	+		Pf1N1B4_2540	0.89	-1.0
2,883,364	+		Pf1N1B4_2540	0.89	-0.1
2,883,364	+		Pf1N1B4_2540	0.89	+0.9
2,883,365	-		Pf1N1B4_2540	0.89	-1.9
2,883,365	-		Pf1N1B4_2540	0.89	+2.1
2,883,365	-		Pf1N1B4_2540	0.89	-2.0
2,883,365	-		Pf1N1B4_2540	0.89	-0.3
2,883,379	+		Pf1N1B4_2540	0.90	-1.9
2,883,379	+		Pf1N1B4_2540	0.90	-1.9
2,883,379	+		Pf1N1B4_2540	0.90	-0.7
2,883,379	+		Pf1N1B4_2540	0.90	+1.1
2,883,380	-				-2.0
2,883,454	+				+0.7
2,883,454	+				-0.5
2,883,455	-				-0.0
2,883,463	+				+0.6
2,883,463	+				-0.0
2,883,529	+				+0.3
2,883,529	+				+0.7
2,883,529	+				+1.0
2,883,529	+				-0.0
2,883,529	+				-1.2
2,883,529	+				+0.7
2,883,529	+				-0.5
2,883,529	+				-0.3
2,883,529	+				+0.2
2,883,529	+				+1.3
2,883,530	-				-1.3
2,883,530	-				+1.5
2,883,559	+				+0.1
2,883,559	+				+0.1
2,883,688	+		Pf1N1B4_2541	0.21	-0.4
2,883,896	-		Pf1N1B4_2541	0.46	-0.7
2,883,896	-		Pf1N1B4_2541	0.46	+0.8
2,883,931	+		Pf1N1B4_2541	0.50	+0.9
2,883,931	+		Pf1N1B4_2541	0.50	-0.6
2,883,931	+		Pf1N1B4_2541	0.50	+0.4
2,883,931	+		Pf1N1B4_2541	0.50	+0.6
2,883,931	+		Pf1N1B4_2541	0.50	+2.0
2,883,931	+		Pf1N1B4_2541	0.50	+0.9
2,883,932	-		Pf1N1B4_2541	0.50	+1.2
2,883,932	-		Pf1N1B4_2541	0.50	-0.0
2,883,932	-		Pf1N1B4_2541	0.50	-0.7
2,883,932	-		Pf1N1B4_2541	0.50	-1.0
2,883,932	-		Pf1N1B4_2541	0.50	-0.8
2,883,932	-		Pf1N1B4_2541	0.50	-1.0
2,883,932	-		Pf1N1B4_2541	0.50	-0.5
2,883,932	-		Pf1N1B4_2541	0.50	+2.0
2,883,932	-		Pf1N1B4_2541	0.50	+0.6
2,883,932	-				+1.3
2,883,932	-		Pf1N1B4_2541	0.50	+0.3
2,883,933	+		Pf1N1B4_2541	0.50	-2.0
2,883,933	+		Pf1N1B4_2541	0.50	-0.5
2,883,933	+		Pf1N1B4_2541	0.50	-0.7
2,883,933	+		Pf1N1B4_2541	0.50	-0.3
2,883,933	+		Pf1N1B4_2541	0.50	-0.1
2,883,933	+		Pf1N1B4_2541	0.50	-1.2
2,883,933	+		Pf1N1B4_2541	0.50	+0.2
2,883,933	+		Pf1N1B4_2541	0.50	-2.6
2,883,934	-		Pf1N1B4_2541	0.51	-1.2
2,883,934	-		Pf1N1B4_2541	0.51	+1.0
2,883,934	-		Pf1N1B4_2541	0.51	+0.9
2,884,476	+				+0.3
2,884,517	-				+0.3
2,884,517	-				-1.2
2,884,519	+				+0.5
2,884,519	+				-0.2
2,884,519	+				+1.3
2,884,519	+				+1.0
2,884,520	-				-1.3
2,884,520	-				+0.2
2,884,520	-				-0.4
2,884,520	-				+1.0
2,884,520	-				+1.9
2,884,520	-				+0.3
2,884,520	-				-0.1
2,884,520	-				-1.0
2,884,520	-				+0.7
2,884,520	-				-0.3
2,884,520	-				+0.1
2,884,520	-				-0.0
2,884,520	-				-1.3
2,884,520	-				+1.3
2,884,538	-				-0.5
2,884,538	-				-2.0
2,884,541	+				+2.1
2,884,541	+				-1.5
2,884,541	+				-1.7
2,884,541	+				-0.8
2,884,541	+				+0.2
2,884,541	+				-1.3
2,884,541	+				+1.4
2,884,541	+				+1.7
2,884,541	+				+1.8
2,884,541	+				+0.9
2,884,541	+				-2.0
2,884,541	+				+0.3
2,884,541	+				+0.9
2,884,541	+				-1.9
2,884,541	+				+0.4
2,884,541	+				-0.9
2,884,542	-				-0.6
2,884,542	-				+0.3
2,884,542	-				-0.5
2,884,542	-				-0.7
2,884,542	-				+1.0
2,884,542	-				+0.0
2,884,542	-				-2.0
2,884,542	-				-1.0
2,884,542	-				-0.0
2,884,542	-				-2.3
2,884,542	-				-0.3
2,884,542	-				+1.9
2,884,542	-				+0.5
2,884,542	-				+2.6
2,884,542	-				+0.1
2,884,542	-				+0.6
2,884,542	-				+0.3
2,884,542	-				-0.6
2,884,542	-				+0.9
2,884,542	-				+0.3
2,884,542	-				+1.0
2,884,542	-				+0.2
2,884,542	-				+2.9
2,884,542	-				-1.0
2,884,542	-				-0.2
2,884,543	+				-2.6
2,884,543	+				-0.7
2,884,543	+				+1.3
2,884,543	+				+0.2
2,884,544	-				+0.2
2,884,544	-				+1.0
2,884,544	-				+0.6
2,884,544	-				+0.4
2,884,701	-		Pf1N1B4_2542	0.12	+0.7
2,884,801	+		Pf1N1B4_2542	0.21	-0.3
2,884,879	+		Pf1N1B4_2542	0.28	-0.3
2,884,880	-		Pf1N1B4_2542	0.28	+0.7
2,885,037	+		Pf1N1B4_2542	0.42	+0.3
2,885,037	+		Pf1N1B4_2542	0.42	-1.6
2,885,037	+		Pf1N1B4_2542	0.42	-0.5
2,885,037	+		Pf1N1B4_2542	0.42	+0.6
2,885,038	-		Pf1N1B4_2542	0.42	-1.7
2,885,038	-		Pf1N1B4_2542	0.42	-0.7
2,885,038	-		Pf1N1B4_2542	0.42	+0.7
2,885,050	+		Pf1N1B4_2542	0.43	+1.7
2,885,050	+		Pf1N1B4_2542	0.43	+1.0
2,885,050	+		Pf1N1B4_2542	0.43	-0.0
2,885,051	-		Pf1N1B4_2542	0.43	-1.9
2,885,158	+		Pf1N1B4_2542	0.52	+0.3
2,885,159	-		Pf1N1B4_2542	0.52	+0.6
2,885,221	-		Pf1N1B4_2542	0.58	+1.4
2,885,243	-		Pf1N1B4_2542	0.60	+0.4
2,885,243	-		Pf1N1B4_2542	0.60	-1.1