Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2538

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
2,878,847	-				-0.3
2,878,847	-				-0.3
2,878,864	+				-0.7
2,878,864	+				-1.3
2,878,864	+				+0.8
2,878,864	+				+0.3
2,878,864	+				+0.8
2,878,864	+				+0.2
2,878,864	+				-1.3
2,878,865	-				+0.3
2,878,865	-				-0.5
2,878,865	-				+0.2
2,878,865	-				+0.8
2,878,865	-				-1.0
2,878,865	-				-0.3
2,878,894	+				-0.3
2,878,894	+				+1.1
2,878,894	+				-1.0
2,878,895	-				+0.2
2,878,895	-				+1.3
2,879,046	-		Pf1N1B4_2537	0.27	+0.4
2,879,046	-		Pf1N1B4_2537	0.27	-0.2
2,879,185	-		Pf1N1B4_2537	0.49	+0.5
2,879,253	+		Pf1N1B4_2537	0.59	+0.4
2,879,254	-		Pf1N1B4_2537	0.60	+2.9
2,879,254	-		Pf1N1B4_2537	0.60	+1.1
2,879,487	+				-0.5
2,879,487	+				-0.2
2,879,488	-				-1.1
2,879,488	-				-1.0
2,879,488	-				+0.3
2,879,653	-				-1.1
2,879,717	-				-0.7
2,879,717	-				-1.4
2,879,799	+				+0.3
2,879,800	-				+0.3
2,879,805	+				+0.3
2,879,806	-				+1.6
2,879,911	-				-0.0
2,879,911	-				+0.5
2,880,126	+		Pf1N1B4_2538	0.25	+1.3
2,880,127	-		Pf1N1B4_2538	0.25	-2.9
2,880,127	-		Pf1N1B4_2538	0.25	+0.6
2,880,127	-		Pf1N1B4_2538	0.25	+0.0
2,880,127	-		Pf1N1B4_2538	0.25	+0.9
2,880,127	-		Pf1N1B4_2538	0.25	-1.8
2,880,441	+		Pf1N1B4_2538	0.53	-0.7
2,880,441	+		Pf1N1B4_2538	0.53	+1.5
2,880,441	+		Pf1N1B4_2538	0.53	-0.1
2,880,442	-				+0.3
2,880,540	+		Pf1N1B4_2538	0.62	+0.6
2,880,540	+		Pf1N1B4_2538	0.62	-1.0
2,880,541	-		Pf1N1B4_2538	0.62	+0.9
2,880,795	+		Pf1N1B4_2538	0.85	-0.5
2,880,795	+		Pf1N1B4_2538	0.85	+0.0
2,880,795	+		Pf1N1B4_2538	0.85	-1.9
2,880,795	+		Pf1N1B4_2538	0.85	-0.2
2,880,795	+		Pf1N1B4_2538	0.85	-1.7
2,880,795	+		Pf1N1B4_2538	0.85	-1.0
2,880,795	+		Pf1N1B4_2538	0.85	+0.1
2,880,796	-				+2.9
2,880,952	+				-0.7
2,881,012	+				-0.3
2,881,012	+				+0.3
2,881,012	+				+0.5
2,881,012	+				+0.1
2,881,012	+				-1.1
2,881,012	+				-0.2
2,881,012	+				-0.7
2,881,012	+				+0.7
2,881,012	+				-2.4
2,881,013	-				+0.8
2,881,013	-				+0.1
2,881,013	-				-0.4
2,881,013	-				-0.5
2,881,013	-				+0.3
2,881,013	-				+0.5
2,881,013	-				+0.5
2,881,147	+		Pf1N1B4_2539	0.13	-0.9
2,881,148	-		Pf1N1B4_2539	0.13	+0.1
2,881,148	-		Pf1N1B4_2539	0.13	+1.0
2,881,195	+		Pf1N1B4_2539	0.17	-2.5
2,881,195	+		Pf1N1B4_2539	0.17	-0.1
2,881,195	+		Pf1N1B4_2539	0.17	-0.2
2,881,259	+		Pf1N1B4_2539	0.23	+0.3
2,881,260	-				+1.3
2,881,348	+		Pf1N1B4_2539	0.32	-1.3
2,881,349	-		Pf1N1B4_2539	0.32	+0.6
2,881,510	+		Pf1N1B4_2539	0.47	-0.7
2,881,510	+		Pf1N1B4_2539	0.47	+1.1
2,881,510	+		Pf1N1B4_2539	0.47	-0.7
2,881,511	-		Pf1N1B4_2539	0.48	-0.0
2,881,561	+		Pf1N1B4_2539	0.52	-1.5
2,881,561	+		Pf1N1B4_2539	0.52	-1.7
2,881,568	+		Pf1N1B4_2539	0.53	-0.6
2,881,568	+		Pf1N1B4_2539	0.53	+0.5
2,881,568	+		Pf1N1B4_2539	0.53	-0.1
2,881,666	+		Pf1N1B4_2539	0.62	+0.5
2,881,702	+		Pf1N1B4_2539	0.66	-2.2
2,881,768	+		Pf1N1B4_2539	0.72	-0.7
2,881,769	-		Pf1N1B4_2539	0.72	-0.0
2,881,873	+		Pf1N1B4_2539	0.82	-0.9
2,881,874	-		Pf1N1B4_2539	0.82	-0.7