Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2262

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
2,577,691	+		Pf1N1B4_2261	0.21	+0.1
2,577,691	+		Pf1N1B4_2261	0.21	-0.2
2,577,760	+		Pf1N1B4_2261	0.27	+1.4
2,577,887	-		Pf1N1B4_2261	0.38	-1.2
2,578,174	+		Pf1N1B4_2261	0.63	+0.4
2,578,174	+		Pf1N1B4_2261	0.63	+1.0
2,578,174	+		Pf1N1B4_2261	0.63	+0.2
2,578,174	+		Pf1N1B4_2261	0.63	+1.1
2,578,174	+		Pf1N1B4_2261	0.63	-1.9
2,578,300	+		Pf1N1B4_2261	0.74	-0.7
2,578,300	+		Pf1N1B4_2261	0.74	-0.2
2,578,300	+		Pf1N1B4_2261	0.74	-1.6
2,578,300	+		Pf1N1B4_2261	0.74	+0.9
2,578,300	+		Pf1N1B4_2261	0.74	+1.8
2,578,300	+		Pf1N1B4_2261	0.74	+0.1
2,578,300	+		Pf1N1B4_2261	0.74	-0.9
2,578,301	-		Pf1N1B4_2261	0.74	-0.8
2,578,301	-		Pf1N1B4_2261	0.74	+0.7
2,578,301	-		Pf1N1B4_2261	0.74	+1.4
2,578,348	+		Pf1N1B4_2261	0.78	+0.4
2,578,348	+		Pf1N1B4_2261	0.78	+1.0
2,578,349	-		Pf1N1B4_2261	0.78	-0.1
2,578,349	-		Pf1N1B4_2261	0.78	-0.2
2,578,349	-		Pf1N1B4_2261	0.78	+1.2
2,578,438	+		Pf1N1B4_2261	0.86	-0.4
2,578,438	+		Pf1N1B4_2261	0.86	+0.4
2,578,438	+		Pf1N1B4_2261	0.86	-1.2
2,578,462	+		Pf1N1B4_2261	0.88	+0.8
2,578,462	+		Pf1N1B4_2261	0.88	+0.4
2,578,462	+		Pf1N1B4_2261	0.88	-0.2
2,578,462	+		Pf1N1B4_2261	0.88	-0.6
2,578,463	-		Pf1N1B4_2261	0.88	-0.4
2,578,463	-		Pf1N1B4_2261	0.88	+0.4
2,578,463	-		Pf1N1B4_2261	0.88	+0.5
2,578,463	-		Pf1N1B4_2261	0.88	+1.2
2,578,463	-		Pf1N1B4_2261	0.88	+2.0
2,578,552	+				+2.4
2,578,552	+				-0.2
2,578,552	+				-0.5
2,578,552	+				+0.4
2,578,552	+				+0.7
2,578,552	+				-0.8
2,578,552	+				+0.9
2,578,552	+				-2.0
2,578,552	+				-0.6
2,578,553	-				-0.5
2,578,553	-				-1.8
2,578,553	-				+1.1
2,578,553	-				+1.4
2,578,553	-				+1.5
2,578,573	-				-0.5
2,578,583	+				-0.0
2,578,583	+				+1.4
2,578,583	+				+0.4
2,578,583	+				-1.6
2,578,584	-				-1.2
2,578,584	-				-0.2
2,578,584	-				+0.8
2,578,630	+				-0.3
2,578,630	+				-0.8
2,578,630	+				+0.8
2,578,630	+				+0.9
2,578,756	-		Pf1N1B4_2262	0.18	-0.0
2,578,767	+		Pf1N1B4_2262	0.19	-0.6
2,578,767	+		Pf1N1B4_2262	0.19	+1.6
2,578,767	+		Pf1N1B4_2262	0.19	+2.9
2,578,767	+		Pf1N1B4_2262	0.19	+0.6
2,578,767	+		Pf1N1B4_2262	0.19	-1.0
2,578,767	+		Pf1N1B4_2262	0.19	-0.5
2,578,767	+		Pf1N1B4_2262	0.19	+1.7
2,578,767	+		Pf1N1B4_2262	0.19	+1.8
2,578,768	-		Pf1N1B4_2262	0.19	-0.0
2,578,768	-		Pf1N1B4_2262	0.19	+0.5
2,578,768	-		Pf1N1B4_2262	0.19	+0.2
2,578,768	-		Pf1N1B4_2262	0.19	-0.4
2,578,768	-		Pf1N1B4_2262	0.19	-1.6
2,578,803	-		Pf1N1B4_2262	0.23	-1.9
2,578,803	-		Pf1N1B4_2262	0.23	+0.8
2,578,815	+				+2.1
2,578,815	+		Pf1N1B4_2262	0.24	-2.0
2,578,815	+		Pf1N1B4_2262	0.24	-0.8
2,578,815	+		Pf1N1B4_2262	0.24	+0.1
2,578,815	+		Pf1N1B4_2262	0.24	-0.9
2,578,815	+		Pf1N1B4_2262	0.24	-0.8
2,578,815	+		Pf1N1B4_2262	0.24	-1.2
2,578,816	-		Pf1N1B4_2262	0.24	+0.9
2,578,842	+		Pf1N1B4_2262	0.27	-1.7
2,578,842	+		Pf1N1B4_2262	0.27	+1.3
2,578,842	+		Pf1N1B4_2262	0.27	-1.2
2,578,842	+		Pf1N1B4_2262	0.27	+0.1
2,578,842	+		Pf1N1B4_2262	0.27	+0.1
2,578,842	+		Pf1N1B4_2262	0.27	+0.6
2,578,842	+		Pf1N1B4_2262	0.27	-1.6
2,578,842	+		Pf1N1B4_2262	0.27	-0.5
2,578,843	-		Pf1N1B4_2262	0.27	+0.1
2,578,843	-		Pf1N1B4_2262	0.27	+0.3
2,578,843	-		Pf1N1B4_2262	0.27	-0.0
2,578,843	-		Pf1N1B4_2262	0.27	-1.2
2,578,843	-		Pf1N1B4_2262	0.27	+1.3
2,578,843	-		Pf1N1B4_2262	0.27	+0.4
2,578,854	+		Pf1N1B4_2262	0.28	+0.4
2,578,855	-		Pf1N1B4_2262	0.28	-0.1
2,578,924	-		Pf1N1B4_2262	0.36	+1.4
2,579,013	+		Pf1N1B4_2262	0.46	-0.6
2,579,014	-		Pf1N1B4_2262	0.46	+1.4
2,579,014	-		Pf1N1B4_2262	0.46	-0.4
2,579,014	-		Pf1N1B4_2262	0.46	-2.2
2,579,121	+		Pf1N1B4_2262	0.57	+0.3
2,579,122	-		Pf1N1B4_2262	0.57	-0.2
2,579,122	-		Pf1N1B4_2262	0.57	+1.4
2,579,122	-		Pf1N1B4_2262	0.57	+1.1
2,579,136	+		Pf1N1B4_2262	0.59	-0.6
2,579,136	+		Pf1N1B4_2262	0.59	-0.6
2,579,137	-		Pf1N1B4_2262	0.59	-1.0
2,579,137	-		Pf1N1B4_2262	0.59	+0.6
2,579,137	-		Pf1N1B4_2262	0.59	+1.7
2,579,142	+		Pf1N1B4_2262	0.60	+0.5
2,579,142	+		Pf1N1B4_2262	0.60	-0.6
2,579,142	+		Pf1N1B4_2262	0.60	+0.1
2,579,143	-		Pf1N1B4_2262	0.60	+0.7
2,579,143	-		Pf1N1B4_2262	0.60	-0.1
2,579,480	+				-2.3
2,579,481	-				+1.4
2,579,481	-				-0.2
2,579,564	+				-0.7
2,579,564	+				+0.4
2,579,564	+				+0.2
2,579,564	+				+0.4
2,579,564	+				+0.4
2,579,591	+				-0.1
2,579,592	-				+0.6
2,579,592	-				-0.3
2,579,592	-				-2.7
2,579,648	+		Pf1N1B4_2263	0.15	-1.1
2,579,648	+		Pf1N1B4_2263	0.15	+0.6
2,579,648	+		Pf1N1B4_2263	0.15	-0.3
2,579,649	-		Pf1N1B4_2263	0.16	+0.7
2,579,714	+		Pf1N1B4_2263	0.23	+0.1
2,579,770	+		Pf1N1B4_2263	0.29	+2.9
2,579,954	+		Pf1N1B4_2263	0.50	+0.6
2,579,955	-		Pf1N1B4_2263	0.50	+1.9
2,579,955	-		Pf1N1B4_2263	0.50	-0.4
2,579,955	-		Pf1N1B4_2263	0.50	+0.2
2,579,955	-		Pf1N1B4_2263	0.50	+0.3
2,579,955	-				+0.4