Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2237

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
2,551,051	+		Pf1N1B4_2236	0.77	-0.9
2,551,140	+		Pf1N1B4_2236	0.80	+1.4
2,551,140	+		Pf1N1B4_2236	0.80	-0.9
2,551,140	+		Pf1N1B4_2236	0.80	-0.7
2,551,140	+		Pf1N1B4_2236	0.80	-2.0
2,551,140	+		Pf1N1B4_2236	0.80	+1.6
2,551,140	+		Pf1N1B4_2236	0.80	-1.4
2,551,140	+		Pf1N1B4_2236	0.80	-0.2
2,551,140	+		Pf1N1B4_2236	0.80	-0.2
2,551,140	+		Pf1N1B4_2236	0.80	+1.4
2,551,140	+		Pf1N1B4_2236	0.80	+0.4
2,551,140	+		Pf1N1B4_2236	0.80	+0.1
2,551,140	+		Pf1N1B4_2236	0.80	+1.7
2,551,140	+		Pf1N1B4_2236	0.80	-0.2
2,551,141	-		Pf1N1B4_2236	0.80	-0.4
2,551,141	-		Pf1N1B4_2236	0.80	+1.2
2,551,141	-		Pf1N1B4_2236	0.80	-0.2
2,551,141	-		Pf1N1B4_2236	0.80	+1.6
2,551,141	-		Pf1N1B4_2236	0.80	+1.3
2,551,141	-		Pf1N1B4_2236	0.80	-1.3
2,551,141	-		Pf1N1B4_2236	0.80	-0.4
2,551,141	-		Pf1N1B4_2236	0.80	+0.6
2,551,204	-		Pf1N1B4_2236	0.82	-0.6
2,551,242	+		Pf1N1B4_2236	0.84	-0.6
2,551,242	+		Pf1N1B4_2236	0.84	-1.3
2,551,242	+		Pf1N1B4_2236	0.84	-0.4
2,551,243	-		Pf1N1B4_2236	0.84	+1.4
2,551,243	-		Pf1N1B4_2236	0.84	-0.6
2,551,350	+		Pf1N1B4_2236	0.87	+0.7
2,551,351	-		Pf1N1B4_2236	0.87	-2.2
2,551,538	+				-0.3
2,551,538	+				+0.4
2,551,539	-				-0.6
2,551,539	-				+0.1
2,551,539	-				+0.8
2,551,539	-				+0.6
2,551,539	-				-2.0
2,551,539	-				-2.0
2,551,539	-				+0.9
2,551,539	-				-0.9
2,551,539	-				+0.1
2,551,539	-				-0.1
2,551,539	-				-1.7
2,551,539	-				-0.5
2,551,539	-				+1.4
2,551,575	+				-0.9
2,551,575	+				+0.1
2,551,576	-				+0.8
2,551,622	+				-2.5
2,551,622	+				-1.6
2,551,622	+				+0.0
2,551,622	+				+0.3
2,551,622	+				-0.0
2,551,622	+				+0.9
2,551,623	-				-0.4
2,551,623	-				-1.6
2,551,623	-				+0.7
2,551,623	-				-0.5
2,551,626	+				+0.4
2,551,626	+				-0.6
2,551,626	+				-1.7
2,551,627	-				+0.8
2,551,659	+				-0.3
2,551,659	+				+1.2
2,551,659	+				-1.7
2,551,820	+				+0.4
2,551,820	+				+0.5
2,551,820	+				+0.0
2,551,820	+				-0.4
2,551,821	-				+0.2
2,551,877	+				+1.7
2,551,877	+				+0.3
2,551,877	+				-0.3
2,551,877	+				-0.6
2,551,877	+				+0.3
2,551,877	+				-0.9
2,551,878	-				-0.4
2,551,970	-		Pf1N1B4_2237	0.29	+0.4
2,551,986	-		Pf1N1B4_2237	0.34	-1.8
2,552,075	+		Pf1N1B4_2237	0.62	-0.2
2,552,075	+		Pf1N1B4_2237	0.62	+0.8
2,552,075	+		Pf1N1B4_2237	0.62	-1.6
2,552,076	-		Pf1N1B4_2237	0.62	-0.9
2,552,076	-		Pf1N1B4_2237	0.62	+0.0
2,552,076	-		Pf1N1B4_2237	0.62	-0.6
2,552,076	-		Pf1N1B4_2237	0.62	-0.7
2,552,076	-		Pf1N1B4_2237	0.62	+0.8
2,552,076	-				+0.4
2,552,103	+		Pf1N1B4_2237	0.71	-2.4
2,552,103	+		Pf1N1B4_2237	0.71	-0.2
2,552,104	-		Pf1N1B4_2237	0.71	-0.2
2,552,104	-		Pf1N1B4_2237	0.71	+2.0
2,552,173	-				-0.6
2,552,196	+				+1.2
2,552,196	+				-2.4
2,552,196	+				-2.0
2,552,196	+				+0.0
2,552,196	+				-0.6
2,552,197	-				-0.4
2,552,197	-				+0.4
2,552,197	-				+0.8
2,552,197	-				-1.7
2,552,219	+				-0.2
2,552,219	+				-0.4
2,552,219	+				+0.6
2,552,219	+				-2.2
2,552,220	-				-1.2
2,552,220	-				-2.7
2,552,220	-				+1.0
2,552,243	+				-0.9
2,552,243	+				+1.2
2,552,374	+				-2.4
2,552,375	-				+0.4
2,552,375	-				+1.3
2,552,375	-				+0.1
2,552,563	+		Pf1N1B4_2238	0.11	-0.6
2,552,564	-		Pf1N1B4_2238	0.11	-1.2
2,552,564	-		Pf1N1B4_2238	0.11	+0.7
2,552,770	+		Pf1N1B4_2238	0.22	-0.1
2,552,770	+		Pf1N1B4_2238	0.22	-1.6
2,552,770	+		Pf1N1B4_2238	0.22	+0.1
2,552,771	-		Pf1N1B4_2238	0.22	+0.2
2,552,771	-		Pf1N1B4_2238	0.22	+0.4
2,552,771	-		Pf1N1B4_2238	0.22	+0.3
2,553,079	+		Pf1N1B4_2238	0.40	+0.4
2,553,079	+		Pf1N1B4_2238	0.40	+0.7
2,553,079	+		Pf1N1B4_2238	0.40	-0.2
2,553,079	+		Pf1N1B4_2238	0.40	+0.0
2,553,079	+		Pf1N1B4_2238	0.40	-1.9
2,553,080	-		Pf1N1B4_2238	0.40	-2.7
2,553,080	-		Pf1N1B4_2238	0.40	-0.5
2,553,080	-		Pf1N1B4_2238	0.40	-0.1
2,553,080	-		Pf1N1B4_2238	0.40	-0.2
2,553,080	-		Pf1N1B4_2238	0.40	-0.2