Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2031

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
2,316,679	-		Pf1N1B4_2029	0.62	-1.3
2,316,679	-		Pf1N1B4_2029	0.62	+1.1
2,316,730	+		Pf1N1B4_2029	0.83	+0.2
2,316,744	+		Pf1N1B4_2029	0.88	+1.1
2,316,744	+		Pf1N1B4_2029	0.88	-0.3
2,316,744	+		Pf1N1B4_2029	0.88	-1.7
2,316,745	-		Pf1N1B4_2029	0.88	+1.2
2,316,813	-				-0.5
2,316,813	-				-1.1
2,316,813	-				+1.7
2,316,813	-				+0.5
2,316,813	-				-0.8
2,317,071	+		Pf1N1B4_2030	0.44	+0.3
2,317,071	+		Pf1N1B4_2030	0.44	+0.5
2,317,071	+		Pf1N1B4_2030	0.44	-1.3
2,317,071	+		Pf1N1B4_2030	0.44	-0.1
2,317,071	+		Pf1N1B4_2030	0.44	-1.8
2,317,071	+		Pf1N1B4_2030	0.44	+0.3
2,317,072	-		Pf1N1B4_2030	0.44	+1.9
2,317,072	-		Pf1N1B4_2030	0.44	+0.7
2,317,072	-		Pf1N1B4_2030	0.44	-0.2
2,317,072	-		Pf1N1B4_2030	0.44	-0.8
2,317,072	-		Pf1N1B4_2030	0.44	-1.7
2,317,072	-		Pf1N1B4_2030	0.44	-0.5
2,317,072	-		Pf1N1B4_2030	0.44	+0.5
2,317,264	+		Pf1N1B4_2030	0.77	-0.7
2,317,264	+		Pf1N1B4_2030	0.77	-0.1
2,317,264	+		Pf1N1B4_2030	0.77	-2.5
2,317,264	+		Pf1N1B4_2030	0.77	+0.5
2,317,264	+		Pf1N1B4_2030	0.77	+0.9
2,317,264	+		Pf1N1B4_2030	0.77	-0.1
2,317,265	-		Pf1N1B4_2030	0.78	-0.5
2,317,265	-		Pf1N1B4_2030	0.78	+1.1
2,317,265	-		Pf1N1B4_2030	0.78	+0.6
2,317,275	+		Pf1N1B4_2030	0.79	-2.8
2,317,275	+		Pf1N1B4_2030	0.79	+0.3
2,317,275	+		Pf1N1B4_2030	0.79	+0.3
2,317,275	+		Pf1N1B4_2030	0.79	-1.3
2,317,275	+		Pf1N1B4_2030	0.79	+0.1
2,317,275	+		Pf1N1B4_2030	0.79	+1.1
2,317,276	-		Pf1N1B4_2030	0.79	-0.5
2,317,276	-		Pf1N1B4_2030	0.79	-0.7
2,317,276	-		Pf1N1B4_2030	0.79	-0.3
2,317,276	-		Pf1N1B4_2030	0.79	+0.5
2,317,276	-		Pf1N1B4_2030	0.79	-0.8
2,317,393	-				-0.9
2,317,406	+				-1.1
2,317,407	-				+1.5
2,317,448	+				+0.1
2,317,448	+				+0.2
2,317,449	-				+0.9
2,317,449	-				+0.0
2,317,518	-				-0.2
2,317,518	-				-2.7
2,317,579	+				+3.5
2,317,579	+				+1.0
2,317,579	+				-2.0
2,317,579	+				-2.0
2,317,579	+				+0.3
2,317,580	-				-1.2
2,317,580	-				+1.8
2,317,580	-				-0.5
2,317,580	-				-1.0
2,317,580	-				-1.0
2,317,580	-				+1.5
2,317,580	-				-1.5
2,317,742	-				+2.5
2,317,772	+		Pf1N1B4_2031	0.28	-0.2
2,317,772	+		Pf1N1B4_2031	0.28	-0.7
2,317,772	+		Pf1N1B4_2031	0.28	-1.3
2,317,772	+		Pf1N1B4_2031	0.28	-0.5
2,317,772	+		Pf1N1B4_2031	0.28	-0.5
2,317,772	+		Pf1N1B4_2031	0.28	-0.8
2,317,773	-		Pf1N1B4_2031	0.29	-2.2
2,317,773	-		Pf1N1B4_2031	0.29	+0.9
2,317,773	-		Pf1N1B4_2031	0.29	-1.3
2,317,773	-		Pf1N1B4_2031	0.29	-0.5
2,317,850	+		Pf1N1B4_2031	0.37	-1.7
2,317,850	+		Pf1N1B4_2031	0.37	+0.5
2,317,850	+		Pf1N1B4_2031	0.37	-0.5
2,317,850	+		Pf1N1B4_2031	0.37	-0.7
2,317,850	+		Pf1N1B4_2031	0.37	+0.3
2,317,850	+		Pf1N1B4_2031	0.37	+0.0
2,317,850	+		Pf1N1B4_2031	0.37	-2.8
2,317,851	-		Pf1N1B4_2031	0.37	-1.3
2,317,851	-		Pf1N1B4_2031	0.37	-0.1
2,317,851	-		Pf1N1B4_2031	0.37	+0.9
2,317,851	-		Pf1N1B4_2031	0.37	+0.5
2,317,879	+		Pf1N1B4_2031	0.40	+0.5
2,317,879	+		Pf1N1B4_2031	0.40	+0.3
2,317,879	+		Pf1N1B4_2031	0.40	+0.0
2,317,880	-		Pf1N1B4_2031	0.40	-0.3
2,317,880	-		Pf1N1B4_2031	0.40	-1.0
2,317,880	-		Pf1N1B4_2031	0.40	+2.3
2,317,880	-		Pf1N1B4_2031	0.40	-0.1
2,317,880	-		Pf1N1B4_2031	0.40	-0.3
2,317,880	-		Pf1N1B4_2031	0.40	-1.1
2,317,880	-		Pf1N1B4_2031	0.40	-0.8
2,317,907	+		Pf1N1B4_2031	0.43	+1.5
2,317,907	+		Pf1N1B4_2031	0.43	-0.7
2,317,907	+		Pf1N1B4_2031	0.43	+2.1
2,317,907	+		Pf1N1B4_2031	0.43	-0.5
2,317,907	+		Pf1N1B4_2031	0.43	-0.5
2,317,907	+		Pf1N1B4_2031	0.43	-1.8
2,317,908	-		Pf1N1B4_2031	0.44	+1.0
2,317,908	-		Pf1N1B4_2031	0.44	+0.2
2,317,908	-		Pf1N1B4_2031	0.44	+1.2
2,317,908	-		Pf1N1B4_2031	0.44	+2.7
2,317,971	+		Pf1N1B4_2031	0.51	-0.1
2,317,972	-		Pf1N1B4_2031	0.51	-1.1
2,318,304	-		Pf1N1B4_2031	0.88	-1.1
2,318,489	-				-1.5
2,318,900	+				-1.6
2,318,942	-				+1.0
2,318,942	-				-1.0
2,318,942	-				-1.1
2,318,942	-				-1.2
2,318,942	-				-2.1
2,318,956	-				+1.5
2,318,966	-				-0.6
2,318,966	-				+1.2
2,318,966	-				+0.7
2,318,966	-				+0.2
2,318,966	-				+0.7
2,318,966	-				-0.1
2,318,966	-				-0.2
2,318,992	-				+1.9
2,318,992	-				+1.3
2,318,992	-				+2.3
2,318,992	-				+0.1
2,318,992	-				+0.7
2,318,992	-				+1.1
2,318,992	-				+0.1
2,318,992	-				-1.1
2,318,992	-				-0.7
2,318,992	-				-0.8
2,318,992	-				-2.0
2,318,994	+				-0.8
2,318,994	+				-2.8
2,318,995	-				-1.1
2,318,995	-				+2.1
2,318,995	-				+0.4
2,318,995	-				+2.5
2,318,995	-				+1.5
2,318,995	-				+0.8
2,318,995	-				-1.5
2,318,995	-				+1.2
2,318,995	-				-0.6
2,318,995	-				-0.1
2,318,995	-				-1.7
2,318,995	-				-0.5
2,318,995	-				-0.1
2,318,995	-				+1.5
2,318,995	-				+0.7
2,318,995	-				+0.9
2,318,995	-				+0.4
2,318,995	-				+0.5
2,318,995	-				+0.1
2,318,995	-				+1.0
2,318,995	-				+1.6
2,319,086	-				+0.7
2,319,101	-				+0.9
2,319,109	+				-2.9
2,319,110	-				+0.3
2,319,110	-				+1.3
2,319,110	-				+0.2
2,319,110	-				+0.9
2,319,110	-				+0.4
2,319,110	-				+0.9
2,319,110	-				+0.8
2,319,110	-				-0.3
2,319,110	-				+0.7
2,319,112	-				+0.5
2,319,165	-				+1.1
2,319,165	-				-0.3
2,319,175	-				+0.6
2,319,175	-				+0.9
2,319,175	-				+0.9
2,319,175	-				-0.2
2,319,175	-				-0.8
2,319,175	-				-0.8
2,319,175	-				-0.3
2,319,175	-				+1.1
2,319,175	-				+1.5
2,319,175	-				-0.8
2,319,254	+				-0.1
2,319,255	-				+1.5
2,319,255	-				+2.3
2,319,255	-				-0.2
2,319,255	-				+1.2
2,319,256	+				-1.8
2,319,256	+				+0.5
2,319,256	+				-0.8
2,319,256	+				-0.2
2,319,257	-				+0.6
2,319,257	-				+0.7
2,319,257	-				+0.0
2,319,257	-				+0.5
2,319,257	-				-1.5
2,319,257	-				+0.5
2,319,257	-				+2.1
2,319,257	-				+1.4
2,319,257	-				+1.9
2,319,257	-				+1.1
2,319,257	-				+0.9
2,319,257	-				+1.1
2,319,257	-				+0.6
2,319,339	+				-0.6
2,319,339	+				-1.1
2,319,339	+				-1.3
2,319,340	-				+0.7
2,319,340	-				+1.3
2,319,340	-				-0.8
2,319,340	-				-0.4
2,319,340	-				-0.8
2,319,340	-				+2.7
2,319,340	-				-1.5
2,319,340	-				+1.1
2,319,341	+				-0.1
2,319,341	+				-1.3
2,319,341	+				+0.5
2,319,341	+				-1.8
2,319,341	+				-1.0
2,319,341	+				-0.5
2,319,341	+				+0.7
2,319,341	+				+0.8
2,319,341	+				+0.5
2,319,342	-				-0.2
2,319,342	-				+0.7
2,319,342	-				-0.4
2,319,342	-				-1.3
2,319,342	-				+0.9
2,319,342	-				+2.0
2,319,342	-				+0.6
2,319,342	-				-0.1
2,319,342	-				-0.0
2,319,342	-				-0.7
2,319,342	-				+1.8
2,319,342	-				+0.6
2,319,342	-				+0.3
2,319,342	-				+0.3
2,319,342	-				+0.1
2,319,385	-				+0.2