Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2006

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
2,288,632	-		Pf1N1B4_2005	0.54	-0.1
2,288,725	+		Pf1N1B4_2005	0.58	+0.0
2,289,096	+		Pf1N1B4_2005	0.75	-0.5
2,289,106	-				-0.1
2,289,151	+		Pf1N1B4_2005	0.78	+1.1
2,289,642	+		Pf1N1B4_2006	0.30	-1.7
2,289,642	+		Pf1N1B4_2006	0.30	-1.0
2,289,643	-		Pf1N1B4_2006	0.31	-1.5
2,289,643	-		Pf1N1B4_2006	0.31	-2.0
2,289,643	-		Pf1N1B4_2006	0.31	+0.1
2,289,643	-		Pf1N1B4_2006	0.31	+1.5
2,289,765	+				-0.3
2,289,766	-				-0.5
2,289,766	-				+0.5
2,289,795	+				+1.0
2,289,833	+				-0.3
2,289,833	+				-1.3
2,289,833	+				-2.5
2,289,833	+				-0.3
2,289,833	+				-0.5
2,289,833	+				-0.8
2,289,834	-				+0.1
2,289,834	-				+0.5
2,289,834	-				-0.3
2,289,834	-				+0.0
2,289,868	+				-0.7
2,289,868	+				-1.5
2,289,868	+				-1.1
2,289,868	+				+1.1
2,289,869	-				-0.3
2,289,869	-				-0.4
2,289,869	-				-1.3
2,289,869	-				+1.2
2,289,869	-				-0.9
2,289,870	+				+0.3
2,289,870	+				+0.8
2,289,870	+				-1.7
2,289,870	+				+1.2
2,289,870	+				-0.4
2,289,870	+				+1.1
2,289,871	-				-0.3
2,289,871	-				-0.6
2,289,871	-				-0.9
2,289,871	-				+1.6
2,289,890	-				+1.1
2,289,950	+				+0.2
2,289,951	-				+0.1
2,289,951	-				-0.3
2,289,989	+				-0.7
2,290,070	+				-1.2
2,290,071	-				-1.3
2,290,071	-				-1.1
2,290,071	-				+1.1
2,290,071	-				+1.5
2,290,071	-				-1.0
2,290,071	-				-1.1
2,290,189	+		Pf1N1B4_2007	0.10	-0.9
2,290,189	+		Pf1N1B4_2007	0.10	+0.7
2,290,189	+		Pf1N1B4_2007	0.10	-1.2
2,290,189	+		Pf1N1B4_2007	0.10	+1.6
2,290,189	+		Pf1N1B4_2007	0.10	+1.8
2,290,189	+		Pf1N1B4_2007	0.10	+3.0
2,290,189	+		Pf1N1B4_2007	0.10	-0.7
2,290,189	+		Pf1N1B4_2007	0.10	+0.3
2,290,190	-		Pf1N1B4_2007	0.10	+2.3
2,290,190	-		Pf1N1B4_2007	0.10	+0.7
2,290,190	-		Pf1N1B4_2007	0.10	+0.5
2,290,190	-		Pf1N1B4_2007	0.10	-1.1
2,290,190	-		Pf1N1B4_2007	0.10	-0.8
2,290,190	-		Pf1N1B4_2007	0.10	-1.1
2,290,190	-		Pf1N1B4_2007	0.10	+1.3
2,290,328	+		Pf1N1B4_2007	0.15	-0.5
2,290,329	-		Pf1N1B4_2007	0.15	+0.7
2,290,360	+		Pf1N1B4_2007	0.16	-0.2
2,290,360	+		Pf1N1B4_2007	0.16	+0.0
2,290,361	-		Pf1N1B4_2007	0.16	-0.1
2,290,446	+		Pf1N1B4_2007	0.19	-0.7
2,290,447	-		Pf1N1B4_2007	0.19	+0.6
2,290,447	-		Pf1N1B4_2007	0.19	+0.3
2,290,629	+		Pf1N1B4_2007	0.26	-1.5
2,290,629	+		Pf1N1B4_2007	0.26	-0.5
2,290,629	+		Pf1N1B4_2007	0.26	-1.5
2,290,629	+		Pf1N1B4_2007	0.26	+2.5
2,290,629	+		Pf1N1B4_2007	0.26	-1.1
2,290,630	-		Pf1N1B4_2007	0.26	+1.0
2,290,630	-		Pf1N1B4_2007	0.26	-0.9