Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1354

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
1,548,718	+		Pf1N1B4_1353	0.47	+1.3
1,548,719	-		Pf1N1B4_1353	0.48	+0.9
1,548,719	-		Pf1N1B4_1353	0.48	+0.3
1,548,785	+		Pf1N1B4_1353	0.51	+1.1
1,548,786	-		Pf1N1B4_1353	0.51	-2.0
1,548,786	-		Pf1N1B4_1353	0.51	+0.5
1,548,786	-		Pf1N1B4_1353	0.51	+1.3
1,549,114	+		Pf1N1B4_1353	0.71	+1.9
1,549,115	-		Pf1N1B4_1353	0.71	+0.7
1,549,115	-		Pf1N1B4_1353	0.71	+0.5
1,549,126	+		Pf1N1B4_1353	0.71	-1.0
1,549,126	+		Pf1N1B4_1353	0.71	+1.3
1,549,126	+		Pf1N1B4_1353	0.71	+0.3
1,549,126	+		Pf1N1B4_1353	0.71	-1.5
1,549,233	-		Pf1N1B4_1353	0.78	+0.2
1,549,495	+				-0.3
1,549,496	-				+0.2
1,549,496	-				+1.9
1,549,528	+				+0.0
1,549,528	+				-1.3
1,549,528	+				-0.3
1,549,528	+				+3.3
1,549,528	+				+0.0
1,549,529	-				+0.8
1,549,529	-				-0.7
1,549,556	+				+0.8
1,549,597	+				+0.2
1,549,597	+				-0.8
1,549,597	+				+0.5
1,549,598	-				+1.0
1,549,620	+				-2.4
1,549,620	+				+0.7
1,549,620	+				-1.0
1,549,621	-				-1.5
1,549,736	-				+0.7
1,549,739	+				-0.3
1,549,740	-				-0.6
1,549,740	-				-1.3
1,549,740	-				-0.7
1,549,740	-				-0.4
1,549,740	-				-0.7
1,549,740	-				+0.3
1,549,740	-				+1.3
1,549,740	-				+0.7
1,549,740	-				-2.0
1,549,791	+				+2.6
1,549,919	+				-0.7
1,549,919	+				-0.5
1,549,935	-		Pf1N1B4_1354	0.10	+0.0
1,549,935	-		Pf1N1B4_1354	0.10	-1.8
1,550,179	-		Pf1N1B4_1354	0.20	-0.3
1,550,179	-		Pf1N1B4_1354	0.20	+0.5
1,550,374	-		Pf1N1B4_1354	0.28	-0.1
1,550,374	-		Pf1N1B4_1354	0.28	-0.4
1,550,374	-		Pf1N1B4_1354	0.28	-2.3
1,550,374	-		Pf1N1B4_1354	0.28	+0.2
1,550,374	-		Pf1N1B4_1354	0.28	+0.5
1,550,632	-		Pf1N1B4_1354	0.39	+0.6
1,550,751	+		Pf1N1B4_1354	0.44	+0.8
1,550,751	+		Pf1N1B4_1354	0.44	+1.1
1,550,752	-		Pf1N1B4_1354	0.44	+0.3
1,550,752	-		Pf1N1B4_1354	0.44	-1.5
1,550,752	-		Pf1N1B4_1354	0.44	+0.2
1,550,752	-		Pf1N1B4_1354	0.44	+0.9
1,550,752	-		Pf1N1B4_1354	0.44	+0.2
1,550,752	-		Pf1N1B4_1354	0.44	+0.6
1,550,754	-		Pf1N1B4_1354	0.44	+1.9
1,550,754	-		Pf1N1B4_1354	0.44	+0.9
1,550,896	+		Pf1N1B4_1354	0.50	+0.3
1,550,896	+		Pf1N1B4_1354	0.50	-0.4
1,550,897	-		Pf1N1B4_1354	0.50	+1.5
1,550,897	-		Pf1N1B4_1354	0.50	-0.1
1,550,897	-		Pf1N1B4_1354	0.50	-0.3
1,550,897	-		Pf1N1B4_1354	0.50	+0.6
1,550,897	-		Pf1N1B4_1354	0.50	+0.7
1,550,897	-		Pf1N1B4_1354	0.50	+0.1
1,550,958	-		Pf1N1B4_1354	0.52	+0.3
1,550,958	-		Pf1N1B4_1354	0.52	+0.7
1,551,030	-		Pf1N1B4_1354	0.55	+0.3
1,551,410	-		Pf1N1B4_1354	0.70	-0.5
1,551,616	-		Pf1N1B4_1354	0.79	+0.2
1,551,618	-		Pf1N1B4_1354	0.79	-0.1
1,551,669	+		Pf1N1B4_1354	0.81	-0.3
1,551,670	-		Pf1N1B4_1354	0.81	+0.2
1,551,712	-		Pf1N1B4_1354	0.83	-1.7
1,551,743	+		Pf1N1B4_1354	0.84	-0.0
1,551,743	+		Pf1N1B4_1354	0.84	-2.6
1,551,870	+		Pf1N1B4_1354	0.89	-0.2
1,551,870	+		Pf1N1B4_1354	0.89	+0.6
1,551,870	+		Pf1N1B4_1354	0.89	+0.5
1,551,870	+		Pf1N1B4_1354	0.89	+0.4
1,551,870	+		Pf1N1B4_1354	0.89	+0.4
1,551,870	+		Pf1N1B4_1354	0.89	-0.8
1,551,870	+		Pf1N1B4_1354	0.89	-1.5
1,551,871	-		Pf1N1B4_1354	0.89	-0.6
1,551,871	-		Pf1N1B4_1354	0.89	-0.3
1,551,871	-		Pf1N1B4_1354	0.89	-1.7
1,551,871	-		Pf1N1B4_1354	0.89	-2.5
1,551,872	+		Pf1N1B4_1354	0.89	+0.6
1,551,872	+		Pf1N1B4_1354	0.89	+0.2
1,551,872	+		Pf1N1B4_1354	0.89	-0.2
1,551,872	+		Pf1N1B4_1354	0.89	-0.4
1,551,872	+		Pf1N1B4_1354	0.89	+0.6
1,551,872	+		Pf1N1B4_1354	0.89	-1.8
1,551,872	+		Pf1N1B4_1354	0.89	-2.1
1,551,873	-		Pf1N1B4_1354	0.89	+1.1
1,551,873	-		Pf1N1B4_1354	0.89	-0.4
1,551,873	-		Pf1N1B4_1354	0.89	+0.3
1,551,873	-		Pf1N1B4_1354	0.89	+0.5
1,551,874	-		Pf1N1B4_1354	0.89	-0.3
1,552,095	+				-1.3
1,552,110	+				-0.2
1,552,111	-				-0.7
1,552,111	-				-0.4
1,552,111	-				-2.0
1,552,111	-				+0.7
1,552,111	-				+1.1
1,552,112	+				-0.5
1,552,122	+				-1.0
1,552,123	-				+0.0
1,552,139	+				-1.8
1,552,139	+				+0.3
1,552,139	+				+0.1
1,552,139	+				+0.9
1,552,139	+				-0.5
1,552,140	-				-0.7
1,552,331	+				+0.3
1,552,480	+		Pf1N1B4_1355	0.12	+0.2
1,552,480	+		Pf1N1B4_1355	0.12	+0.3
1,552,481	-		Pf1N1B4_1355	0.12	+1.1
1,552,481	-		Pf1N1B4_1355	0.12	+1.0
1,552,521	+		Pf1N1B4_1355	0.13	-0.9
1,552,521	+		Pf1N1B4_1355	0.13	+0.3
1,552,521	+		Pf1N1B4_1355	0.13	-0.0
1,552,521	+		Pf1N1B4_1355	0.13	-0.3
1,552,521	+		Pf1N1B4_1355	0.13	-1.3
1,552,521	+		Pf1N1B4_1355	0.13	+1.3
1,552,521	+		Pf1N1B4_1355	0.13	-0.7
1,552,521	+		Pf1N1B4_1355	0.13	+0.3
1,552,522	-		Pf1N1B4_1355	0.13	+1.6
1,552,522	-		Pf1N1B4_1355	0.13	+0.5
1,552,522	-		Pf1N1B4_1355	0.13	-0.4
1,552,642	+		Pf1N1B4_1355	0.18	-1.5
1,552,729	-		Pf1N1B4_1355	0.21	+1.0
1,552,729	-		Pf1N1B4_1355	0.21	-0.7
1,552,742	-		Pf1N1B4_1355	0.21	-2.0
1,552,788	+		Pf1N1B4_1355	0.23	+0.5
1,552,816	+		Pf1N1B4_1355	0.24	+0.6
1,552,817	-		Pf1N1B4_1355	0.24	+0.1
1,552,817	-		Pf1N1B4_1355	0.24	+1.7
1,552,955	+		Pf1N1B4_1355	0.30	-1.5
1,552,956	-		Pf1N1B4_1355	0.30	+0.6
1,552,956	-		Pf1N1B4_1355	0.30	-0.5
1,553,021	+		Pf1N1B4_1355	0.32	-1.1
1,553,120	+		Pf1N1B4_1355	0.36	+0.5
1,553,121	-		Pf1N1B4_1355	0.36	-0.7