Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1045

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
1,180,402	+		Pf1N1B4_1042	0.78	-1.1
1,180,402	+		Pf1N1B4_1042	0.78	-1.8
1,180,507	+				+1.8
1,180,508	-				-1.9
1,180,508	-				+0.1
1,180,508	-				-1.8
1,180,717	+		Pf1N1B4_1043	0.46	+0.0
1,180,717	+		Pf1N1B4_1043	0.46	-1.6
1,180,717	+		Pf1N1B4_1043	0.46	-0.7
1,180,717	+		Pf1N1B4_1043	0.46	-0.6
1,180,717	+		Pf1N1B4_1043	0.46	+0.7
1,180,717	+		Pf1N1B4_1043	0.46	-1.5
1,180,717	+		Pf1N1B4_1043	0.46	-0.7
1,180,717	+		Pf1N1B4_1043	0.46	+0.8
1,180,717	+		Pf1N1B4_1043	0.46	+0.2
1,180,717	+		Pf1N1B4_1043	0.46	-0.1
1,180,717	+		Pf1N1B4_1043	0.46	+0.2
1,180,717	+		Pf1N1B4_1043	0.46	+1.7
1,180,718	-		Pf1N1B4_1043	0.47	-2.3
1,180,718	-		Pf1N1B4_1043	0.47	+1.7
1,180,718	-		Pf1N1B4_1043	0.47	-2.6
1,180,718	-				-1.1
1,180,718	-		Pf1N1B4_1043	0.47	+1.0
1,180,718	-				+0.2
1,180,719	+		Pf1N1B4_1043	0.47	+0.1
1,180,719	+		Pf1N1B4_1043	0.47	-1.1
1,180,720	-		Pf1N1B4_1043	0.47	+1.6
1,180,720	-		Pf1N1B4_1043	0.47	+0.2
1,180,720	-		Pf1N1B4_1043	0.47	-1.0
1,180,720	-		Pf1N1B4_1043	0.47	-1.9
1,180,780	+		Pf1N1B4_1043	0.68	+0.2
1,180,792	+		Pf1N1B4_1043	0.72	+0.9
1,180,883	-				-1.1
1,180,928	-		Pf1N1B4_1044	0.18	+1.0
1,180,953	-		Pf1N1B4_1044	0.25	-1.5
1,181,279	+				+1.6
1,181,285	+				-0.5
1,181,285	+				-0.0
1,181,285	+				-1.1
1,181,285	+				-0.2
1,181,286	-				+0.8
1,181,286	-				-1.4
1,181,286	-				-0.7
1,181,286	-				-0.4
1,181,286	-				+0.9
1,181,308	+				-1.4
1,181,309	-				-0.2
1,181,309	-				-1.4
1,181,309	-				+0.1
1,181,328	+				-0.4
1,181,328	+				-0.4
1,181,329	-				+0.5
1,181,361	+				-2.0
1,181,361	+				-0.6
1,181,361	+				-2.0
1,181,361	+				+1.9
1,181,362	-				-0.0
1,181,362	-				-0.2
1,181,366	-				+0.5
1,181,366	-				-1.0
1,181,500	+				+2.5
1,181,500	+				+0.2
1,181,500	+				-2.3
1,181,500	+				+1.2
1,181,500	+				-0.6
1,181,501	-				-0.4
1,181,630	-		Pf1N1B4_1045	0.18	-1.1
1,181,630	-		Pf1N1B4_1045	0.18	+0.7
1,181,694	+		Pf1N1B4_1045	0.23	+0.3
1,181,695	-		Pf1N1B4_1045	0.24	-0.2
1,181,836	+		Pf1N1B4_1045	0.35	-0.1
1,181,836	+		Pf1N1B4_1045	0.35	-0.9
1,181,837	-		Pf1N1B4_1045	0.35	+0.3
1,181,983	-		Pf1N1B4_1045	0.47	-0.6
1,181,983	-		Pf1N1B4_1045	0.47	+0.6
1,182,265	+		Pf1N1B4_1045	0.69	+0.8
1,182,266	-		Pf1N1B4_1045	0.69	+1.6
1,182,266	-		Pf1N1B4_1045	0.69	-0.1
1,182,266	-		Pf1N1B4_1045	0.69	-0.6
1,182,266	-		Pf1N1B4_1045	0.69	-2.6
1,182,266	-		Pf1N1B4_1045	0.69	-0.7
1,182,266	-		Pf1N1B4_1045	0.69	+0.3
1,182,409	+		Pf1N1B4_1045	0.81	-2.0
1,182,410	-		Pf1N1B4_1045	0.81	+0.4
1,182,410	-		Pf1N1B4_1045	0.81	+0.2
1,182,654	+				+0.5
1,182,654	+				+0.0
1,182,704	+				-0.8
1,182,704	+				-1.8
1,182,705	-				-1.1
1,182,705	-				-0.4
1,182,717	+				-1.6
1,182,717	+				-1.3
1,182,733	-				+0.3
1,182,767	+				-1.1
1,182,768	-				-0.1
1,182,768	-				+2.6
1,182,786	+				+0.2
1,182,787	-				+0.9
1,182,820	+				-0.1
1,182,820	+				+1.8
1,182,821	-				+1.5
1,182,821	-				-1.1
1,182,821	-				-0.3
1,182,821	-				-0.8
1,182,821	-				-0.2