Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11145

Experiment: rhizosphere sample 8; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rhizosphere sample 8; outgrowth in LB
2,365,205	+		ABZR87_RS11135	0.74	-1.0
2,365,502	+		ABZR87_RS11135	0.86	-1.0
2,365,503	-		ABZR87_RS11135	0.86	+1.1
2,365,503	-		ABZR87_RS11135	0.86	-0.1
2,365,503	-		ABZR87_RS11135	0.86	+0.5
2,365,742	+				+1.3
2,365,742	+				-1.6
2,365,742	+				-0.4
2,365,742	+				-1.1
2,365,742	+				+0.5
2,365,743	-				+0.4
2,365,865	+				-0.4
2,365,865	+				+0.4
2,365,865	+				-0.5
2,365,970	-		ABZR87_RS11140	0.51	-0.0
2,365,970	-		ABZR87_RS11140	0.51	+0.4
2,365,970	-		ABZR87_RS11140	0.51	+0.6
2,366,114	+				+0.7
2,366,114	+				-0.7
2,366,115	-				-0.2
2,366,115	-				+0.1
2,366,137	+				-1.0
2,366,137	+				+0.7
2,366,137	+				+0.9
2,366,137	+				-0.9
2,366,138	-				+0.2
2,366,138	-				-0.9
2,366,138	-				+1.1
2,366,322	+		ABZR87_RS11145	0.12	+0.1
2,366,323	-		ABZR87_RS11145	0.12	+1.1
2,366,397	+		ABZR87_RS11145	0.17	-1.0
2,366,397	+		ABZR87_RS11145	0.17	-0.6
2,366,397	+		ABZR87_RS11145	0.17	-1.1
2,366,397	+		ABZR87_RS11145	0.17	-0.3
2,366,397	+		ABZR87_RS11145	0.17	-0.8
2,366,397	+		ABZR87_RS11145	0.17	-1.1
2,366,398	-		ABZR87_RS11145	0.17	-0.3
2,366,398	-		ABZR87_RS11145	0.17	+1.9
2,366,398	-		ABZR87_RS11145	0.17	-0.3
2,366,398	-		ABZR87_RS11145	0.17	-0.6
2,366,400	+		ABZR87_RS11145	0.17	+0.9
2,366,400	+		ABZR87_RS11145	0.17	-0.9
2,366,400	+		ABZR87_RS11145	0.17	-1.9
2,366,400	+		ABZR87_RS11145	0.17	-0.5
2,366,400	+		ABZR87_RS11145	0.17	-0.4
2,366,400	+		ABZR87_RS11145	0.17	-2.8
2,366,401	-		ABZR87_RS11145	0.17	-1.3
2,366,401	-		ABZR87_RS11145	0.17	-1.2
2,366,401	-		ABZR87_RS11145	0.17	+0.4
2,366,516	+		ABZR87_RS11145	0.25	-0.2
2,366,516	+		ABZR87_RS11145	0.25	+1.0
2,366,516	+		ABZR87_RS11145	0.25	-0.7
2,366,516	+		ABZR87_RS11145	0.25	+0.5
2,366,516	+		ABZR87_RS11145	0.25	-0.9
2,366,516	+		ABZR87_RS11145	0.25	+1.5
2,366,517	-		ABZR87_RS11145	0.25	+0.5
2,366,587	-		ABZR87_RS11145	0.30	-2.4
2,366,587	-		ABZR87_RS11145	0.30	+0.3
2,366,637	+		ABZR87_RS11145	0.33	+0.7
2,366,637	+		ABZR87_RS11145	0.33	-2.1
2,366,638	-		ABZR87_RS11145	0.33	-0.0
2,366,638	-		ABZR87_RS11145	0.33	+0.4
2,366,664	+		ABZR87_RS11145	0.35	-0.3
2,366,664	+		ABZR87_RS11145	0.35	-1.1
2,366,664	+		ABZR87_RS11145	0.35	+0.3
2,366,665	-		ABZR87_RS11145	0.35	-0.9
2,366,665	-		ABZR87_RS11145	0.35	-0.8
2,366,665	-		ABZR87_RS11145	0.35	-1.7
2,366,665	-		ABZR87_RS11145	0.35	-1.7
2,366,691	-		ABZR87_RS11145	0.37	-0.2
2,366,691	-		ABZR87_RS11145	0.37	-1.1
2,366,734	-		ABZR87_RS11145	0.40	-1.1
2,366,742	+		ABZR87_RS11145	0.40	-2.6
2,366,743	-		ABZR87_RS11145	0.40	+1.7
2,366,832	+		ABZR87_RS11145	0.47	-0.9
2,366,833	-		ABZR87_RS11145	0.47	-0.7
2,366,833	-		ABZR87_RS11145	0.47	-0.2
2,366,833	-		ABZR87_RS11145	0.47	-1.5
2,366,833	-		ABZR87_RS11145	0.47	+0.1
2,366,833	-		ABZR87_RS11145	0.47	+0.1
2,366,835	+		ABZR87_RS11145	0.47	-0.3
2,366,835	+		ABZR87_RS11145	0.47	+0.2
2,366,835	+		ABZR87_RS11145	0.47	-1.2
2,366,868	+		ABZR87_RS11145	0.49	-0.6
2,366,868	+		ABZR87_RS11145	0.49	-1.1
2,366,868	+		ABZR87_RS11145	0.49	-0.8
2,366,869	-		ABZR87_RS11145	0.49	+2.5
2,366,869	-		ABZR87_RS11145	0.49	-0.7
2,366,916	+		ABZR87_RS11145	0.52	-1.7
2,366,916	+		ABZR87_RS11145	0.52	-0.8
2,366,917	-		ABZR87_RS11145	0.52	+0.8
2,366,917	-		ABZR87_RS11145	0.52	-0.1
2,366,947	-		ABZR87_RS11145	0.54	+0.3
2,367,178	-		ABZR87_RS11145	0.70	-0.6
2,367,252	+		ABZR87_RS11145	0.75	+0.0
2,367,252	+		ABZR87_RS11145	0.75	-0.9
2,367,253	-		ABZR87_RS11145	0.75	-0.8
2,367,253	-		ABZR87_RS11145	0.75	-0.3
2,367,253	-		ABZR87_RS11145	0.75	+0.7
2,367,255	+		ABZR87_RS11145	0.76	-1.2
2,367,255	+		ABZR87_RS11145	0.76	-1.0
2,367,255	+		ABZR87_RS11145	0.76	-1.7
2,367,255	+		ABZR87_RS11145	0.76	-1.0
2,367,255	+		ABZR87_RS11145	0.76	-0.7
2,367,256	-		ABZR87_RS11145	0.76	-1.2
2,367,256	-		ABZR87_RS11145	0.76	-0.6
2,367,256	-		ABZR87_RS11145	0.76	-0.0
2,367,256	-		ABZR87_RS11145	0.76	+0.6
2,367,256	-		ABZR87_RS11145	0.76	+0.9
2,367,256	-		ABZR87_RS11145	0.76	+0.9
2,367,291	+		ABZR87_RS11145	0.78	-1.2
2,367,291	+		ABZR87_RS11145	0.78	-0.4
2,367,291	+		ABZR87_RS11145	0.78	+0.6
2,367,292	-		ABZR87_RS11145	0.78	-0.1
2,367,348	+		ABZR87_RS11145	0.82	-0.5
2,367,348	+		ABZR87_RS11145	0.82	-1.0
2,367,348	+		ABZR87_RS11145	0.82	-1.3
2,367,349	-		ABZR87_RS11145	0.82	+1.5
2,367,426	+		ABZR87_RS11145	0.87	-1.2
2,367,426	+		ABZR87_RS11145	0.87	+0.3
2,367,427	-		ABZR87_RS11145	0.87	-0.7
2,367,465	+		ABZR87_RS11145	0.90	-1.4
2,367,465	+		ABZR87_RS11145	0.90	-0.7
2,367,466	-				+1.1
2,367,788	-		ABZR87_RS11150	0.24	-2.0
2,367,820	+		ABZR87_RS11150	0.29	-1.7
2,367,820	+		ABZR87_RS11150	0.29	-0.2
2,367,821	-		ABZR87_RS11150	0.29	+0.0
2,367,864	+		ABZR87_RS11150	0.35	-0.3
2,367,864	+		ABZR87_RS11150	0.35	-1.6
2,367,864	+		ABZR87_RS11150	0.35	-2.2
2,367,864	+		ABZR87_RS11150	0.35	-0.1
2,367,865	-		ABZR87_RS11150	0.36	-0.3
2,367,865	-		ABZR87_RS11150	0.36	-0.3
2,367,898	+		ABZR87_RS11150	0.40	-1.4
2,368,060	+		ABZR87_RS11150	0.64	+0.1
2,368,060	+		ABZR87_RS11150	0.64	+3.1
2,368,061	-		ABZR87_RS11150	0.64	+1.3
2,368,061	-		ABZR87_RS11150	0.64	-1.5
2,368,141	+		ABZR87_RS11150	0.76	+0.7
2,368,214	-		ABZR87_RS11150	0.87	-0.0
2,368,303	+				-0.3
2,368,304	-				-1.4
2,368,304	-				-0.4
2,368,304	-				-1.8
2,368,489	+				-0.8
2,368,489	+				+0.1
2,368,490	-				-0.3
2,368,490	-				-0.0
2,368,534	+				-0.7
2,368,534	+				+1.2
2,368,535	-				+0.2
2,368,537	+				+0.0
2,368,537	+				-0.5
2,368,537	+				+0.6
2,368,537	+				+1.8
2,368,538	-				-1.6
2,368,538	-				-0.0
2,368,538	-				-1.5
2,368,538	-				-0.2
2,368,538	-				-1.1
2,368,538	-				-1.8