Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1752

Experiment: Valeric 25 mM; anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Valeric 25 mM; anaerobic
2,043,417	+		Rru_A1751	0.45	-0.4
2,043,417	+		Rru_A1751	0.45	+1.2
2,043,471	+		Rru_A1751	0.51	+0.1
2,043,573	+		Rru_A1751	0.62	+1.0
2,043,574	-		Rru_A1751	0.62	-0.0
2,043,574	-		Rru_A1751	0.62	-0.5
2,043,574	-		Rru_A1751	0.62	+0.5
2,043,574	-		Rru_A1751	0.62	-0.1
2,043,574	-		Rru_A1751	0.62	-1.0
2,043,574	-		Rru_A1751	0.62	-0.2
2,043,676	-		Rru_A1751	0.73	+0.3
2,043,676	-		Rru_A1751	0.73	-0.3
2,043,796	-		Rru_A1751	0.86	-0.1
2,043,837	+				-1.0
2,043,847	+				+0.7
2,043,848	-				-0.0
2,043,848	-				+0.6
2,043,849	+				+0.7
2,043,909	-				-0.4
2,043,988	+				-0.4
2,043,988	+				-1.1
2,043,988	+				-0.5
2,043,988	+				-0.9
2,043,989	-				-0.3
2,043,989	-				+0.4
2,044,020	+				-0.7
2,044,069	+				+1.4
2,044,070	-				-0.5
2,044,070	-				-0.6
2,044,070	-				-0.0
2,044,283	+				-2.3
2,044,284	-				+2.3
2,044,302	+				-0.9
2,044,302	+				-0.6
2,044,302	+				+0.8
2,044,303	-				-0.9
2,044,313	+				+0.4
2,044,313	+				-2.6
2,044,313	+				+0.8
2,044,314	-				+1.0
2,044,472	+				-2.3
2,044,473	-				-2.7
2,044,494	-				-0.5
2,044,655	+		Rru_A1752	0.11	+1.5
2,044,655	+		Rru_A1752	0.11	+2.0
2,044,656	-		Rru_A1752	0.11	+1.2
2,044,782	-		Rru_A1752	0.16	-1.9
2,044,886	+		Rru_A1752	0.19	+0.5
2,044,886	+		Rru_A1752	0.19	-4.4
2,044,887	-		Rru_A1752	0.19	-0.2
2,044,887	-		Rru_A1752	0.19	+1.5
2,044,973	-		Rru_A1752	0.23	-4.0
2,045,193	-		Rru_A1752	0.30	-0.9
2,045,285	+		Rru_A1752	0.33	+0.3
2,045,286	-		Rru_A1752	0.33	-0.3
2,045,286	-		Rru_A1752	0.33	-0.9
2,045,286	-		Rru_A1752	0.33	-0.9
2,045,286	-		Rru_A1752	0.33	+0.2
2,045,288	+		Rru_A1752	0.34	+0.4
2,045,288	+		Rru_A1752	0.34	+0.0
2,045,289	-		Rru_A1752	0.34	-0.8
2,045,438	+		Rru_A1752	0.39	-3.7
2,045,438	+		Rru_A1752	0.39	-0.3
2,045,438	+		Rru_A1752	0.39	+0.2
2,045,439	-		Rru_A1752	0.39	-1.1
2,045,527	-		Rru_A1752	0.42	-0.4
2,045,527	-		Rru_A1752	0.42	-0.7
2,045,771	+		Rru_A1752	0.50	-2.2
2,045,771	+		Rru_A1752	0.50	+1.0
2,045,771	+		Rru_A1752	0.50	-0.2
2,045,771	+		Rru_A1752	0.50	-0.7
2,045,870	+		Rru_A1752	0.54	+0.5
2,045,870	+		Rru_A1752	0.54	-0.4
2,045,870	+		Rru_A1752	0.54	-0.6
2,045,870	+		Rru_A1752	0.54	+1.9
2,045,871	-		Rru_A1752	0.54	-0.6
2,045,871	-		Rru_A1752	0.54	-1.5
2,045,871	-		Rru_A1752	0.54	-4.3
2,045,871	-		Rru_A1752	0.54	-0.7
2,045,871	-		Rru_A1752	0.54	-2.6
2,045,871	-		Rru_A1752	0.54	-0.5
2,045,871	-		Rru_A1752	0.54	-1.1
2,045,871	-		Rru_A1752	0.54	-0.3
2,045,871	-		Rru_A1752	0.54	+0.0
2,045,959	+		Rru_A1752	0.57	-0.8
2,045,960	-		Rru_A1752	0.57	-1.9
2,046,008	+		Rru_A1752	0.59	-1.6
2,046,009	-		Rru_A1752	0.59	-0.4
2,046,114	-		Rru_A1752	0.62	+0.4
2,046,114	-		Rru_A1752	0.62	-2.8
2,046,203	-		Rru_A1752	0.66	-0.0
2,046,203	-		Rru_A1752	0.66	+0.8
2,046,302	+		Rru_A1752	0.69	-0.6
2,046,446	+		Rru_A1752	0.74	+0.4
2,046,447	-		Rru_A1752	0.74	+0.2
2,046,447	-		Rru_A1752	0.74	-0.6
2,046,447	-		Rru_A1752	0.74	+0.4
2,046,447	-		Rru_A1752	0.74	-1.4
2,046,447	-		Rru_A1752	0.74	+0.0
2,046,447	-		Rru_A1752	0.74	-0.3
2,046,512	+		Rru_A1752	0.76	-1.9
2,046,512	+		Rru_A1752	0.76	-1.3
2,046,513	-		Rru_A1752	0.76	-3.0
2,046,513	-		Rru_A1752	0.76	-0.1
2,046,513	-		Rru_A1752	0.76	-2.6
2,046,513	-		Rru_A1752	0.76	-0.3
2,046,514	+		Rru_A1752	0.77	-0.1
2,046,514	+		Rru_A1752	0.77	+0.7
2,046,515	-		Rru_A1752	0.77	-0.7
2,046,515	-		Rru_A1752	0.77	+0.6
2,046,515	-		Rru_A1752	0.77	+0.2
2,046,614	+		Rru_A1752	0.80	-1.6
2,046,614	+		Rru_A1752	0.80	-0.3
2,046,614	+		Rru_A1752	0.80	+1.2
2,046,614	+		Rru_A1752	0.80	-0.5
2,046,614	+		Rru_A1752	0.80	+0.3
2,046,614	+		Rru_A1752	0.80	-3.7
2,046,615	-		Rru_A1752	0.80	-0.1
2,046,615	-		Rru_A1752	0.80	-0.7
2,046,615	-		Rru_A1752	0.80	-0.7
2,046,615	-		Rru_A1752	0.80	-0.9
2,046,648	-		Rru_A1752	0.81	+0.5
2,046,707	-		Rru_A1752	0.83	+0.5
2,046,794	+		Rru_A1752	0.86	-1.1
2,046,794	+		Rru_A1752	0.86	-0.0
2,046,794	+		Rru_A1752	0.86	-2.8
2,046,795	-		Rru_A1752	0.86	-2.5
2,046,795	-		Rru_A1752	0.86	-3.3
2,046,795	-		Rru_A1752	0.86	-1.2
2,046,795	-		Rru_A1752	0.86	-1.1
2,046,795	-		Rru_A1752	0.86	+1.3
2,046,795	-		Rru_A1752	0.86	-3.7
2,046,797	-		Rru_A1752	0.86	+1.7
2,046,896	+		Rru_A1752	0.90	+0.2
2,046,896	+		Rru_A1752	0.90	+0.3
2,046,896	+		Rru_A1752	0.90	-2.7
2,046,896	+		Rru_A1752	0.90	-0.9
2,046,896	+		Rru_A1752	0.90	-1.1
2,046,897	-		Rru_A1752	0.90	-0.6
2,046,897	-		Rru_A1752	0.90	-2.0
2,046,897	-		Rru_A1752	0.90	-2.3
2,046,897	-		Rru_A1752	0.90	-0.7
2,046,897	-		Rru_A1752	0.90	-0.5
2,046,897	-		Rru_A1752	0.90	+1.1
2,046,898	+				-1.0
2,046,898	+				-0.8
2,046,899	-				+0.3
2,046,899	-				+0.0
2,046,899	-				-2.9
2,046,943	+				-1.1
2,046,943	+				+0.5
2,046,944	-				+0.1
2,046,976	+				-0.0
2,046,986	-				-1.3
2,046,986	-				+0.2
2,047,007	-				-0.4
2,047,036	+				-0.3
2,047,036	+				-0.1
2,047,036	+				-0.0
2,047,037	-				-0.7
2,047,037	-				+0.4
2,047,037	-				+0.4
2,047,140	-				-0.4
2,047,152	-				-0.2
2,047,152	-				-0.7
2,047,152	-				-3.3
2,047,429	+		Rru_A1753	0.22	-0.3
2,047,430	-		Rru_A1753	0.22	+0.4
2,047,430	-		Rru_A1753	0.22	+1.2
2,047,711	+		Rru_A1753	0.50	-2.1
2,047,711	+		Rru_A1753	0.50	-1.4
2,047,712	-		Rru_A1753	0.51	+0.4
2,047,738	+		Rru_A1753	0.53	-0.2
2,047,739	-		Rru_A1753	0.53	-0.8
2,047,910	-		Rru_A1753	0.71	+0.1