Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS24350 and RR42_RS24355 are separated by 242 nucleotides
RR42_RS24350: RR42_RS24350 - malyl-CoA thiolesterase, at 792,201 to 793,079
_RS24350
RR42_RS24355: RR42_RS24355 - hypothetical protein, at 793,322 to 793,957
_RS24355
Position (kb) 793
794 Strain fitness (log2 ratio) -2
-1
0
1
2 at 792.366 kb on - strand, within RR42_RS24350 at 792.382 kb on - strand, within RR42_RS24350 at 792.404 kb on - strand, within RR42_RS24350 at 792.404 kb on - strand, within RR42_RS24350 at 792.413 kb on + strand, within RR42_RS24350 at 792.413 kb on + strand, within RR42_RS24350 at 792.452 kb on - strand, within RR42_RS24350 at 792.613 kb on + strand, within RR42_RS24350 at 792.613 kb on + strand, within RR42_RS24350 at 792.614 kb on - strand, within RR42_RS24350 at 792.614 kb on - strand, within RR42_RS24350 at 792.614 kb on - strand, within RR42_RS24350 at 792.653 kb on + strand, within RR42_RS24350 at 792.653 kb on + strand, within RR42_RS24350 at 792.654 kb on - strand, within RR42_RS24350 at 792.721 kb on + strand, within RR42_RS24350 at 792.721 kb on + strand, within RR42_RS24350 at 792.750 kb on + strand, within RR42_RS24350 at 792.751 kb on - strand, within RR42_RS24350 at 792.751 kb on - strand, within RR42_RS24350 at 792.811 kb on + strand, within RR42_RS24350 at 792.874 kb on + strand, within RR42_RS24350 at 792.969 kb on - strand, within RR42_RS24350 at 792.969 kb on - strand, within RR42_RS24350 at 793.062 kb on - strand at 793.144 kb on + strand at 793.179 kb on + strand at 793.182 kb on + strand at 793.183 kb on - strand at 793.259 kb on - strand at 793.259 kb on - strand at 793.321 kb on + strand at 793.322 kb on - strand at 793.388 kb on - strand, within RR42_RS24355 at 793.627 kb on + strand, within RR42_RS24355 at 793.731 kb on + strand, within RR42_RS24355 at 793.732 kb on - strand, within RR42_RS24355 at 793.768 kb on - strand, within RR42_RS24355 at 793.768 kb on - strand, within RR42_RS24355 at 793.887 kb on + strand, within RR42_RS24355 at 793.887 kb on + strand, within RR42_RS24355 at 793.888 kb on - strand, within RR42_RS24355 at 793.923 kb on + strand at 793.923 kb on + strand at 793.924 kb on - strand at 793.975 kb on + strand at 793.975 kb on + strand at 793.975 kb on + strand at 794.021 kb on + strand at 794.178 kb on - strand at 794.178 kb on - strand at 794.180 kb on - strand at 794.180 kb on - strand at 794.279 kb on - strand at 794.323 kb on + strand at 794.358 kb on - strand at 794.363 kb on + strand at 794.400 kb on - strand at 794.478 kb on - strand at 794.486 kb on + strand at 794.567 kb on + strand at 794.573 kb on + strand at 794.619 kb on + strand at 794.619 kb on + strand at 794.619 kb on + strand at 794.620 kb on - strand at 794.620 kb on - strand at 794.651 kb on + strand at 794.677 kb on - strand at 794.707 kb on + strand at 794.708 kb on - strand at 794.717 kb on - strand at 794.717 kb on - strand at 794.717 kb on - strand at 794.822 kb on - strand at 794.822 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 792,366 - RR42_RS24350 0.19 -0.2 792,382 - RR42_RS24350 0.21 -0.6 792,404 - RR42_RS24350 0.23 -0.0 792,404 - RR42_RS24350 0.23 +0.4 792,413 + RR42_RS24350 0.24 +0.6 792,413 + RR42_RS24350 0.24 +1.2 792,452 - RR42_RS24350 0.29 -0.4 792,613 + RR42_RS24350 0.47 +0.1 792,613 + RR42_RS24350 0.47 +0.1 792,614 - RR42_RS24350 0.47 +1.0 792,614 - RR42_RS24350 0.47 -1.5 792,614 - RR42_RS24350 0.47 +0.3 792,653 + RR42_RS24350 0.51 -0.5 792,653 + RR42_RS24350 0.51 -0.2 792,654 - RR42_RS24350 0.52 -0.2 792,721 + RR42_RS24350 0.59 -1.1 792,721 + RR42_RS24350 0.59 -0.1 792,750 + RR42_RS24350 0.62 +0.3 792,751 - RR42_RS24350 0.63 -0.4 792,751 - RR42_RS24350 0.63 -0.7 792,811 + RR42_RS24350 0.69 +0.4 792,874 + RR42_RS24350 0.77 +0.2 792,969 - RR42_RS24350 0.87 -1.5 792,969 - RR42_RS24350 0.87 -0.5 793,062 - -0.4 793,144 + -0.2 793,179 + -1.2 793,182 + +0.2 793,183 - -1.0 793,259 - -0.6 793,259 - +0.3 793,321 + +0.4 793,322 - +0.0 793,388 - RR42_RS24355 0.10 -0.1 793,627 + RR42_RS24355 0.48 +0.1 793,731 + RR42_RS24355 0.64 -2.7 793,732 - RR42_RS24355 0.64 +1.8 793,768 - RR42_RS24355 0.70 -0.2 793,768 - RR42_RS24355 0.70 -1.2 793,887 + RR42_RS24355 0.89 +0.1 793,887 + RR42_RS24355 0.89 +0.1 793,888 - RR42_RS24355 0.89 -0.5 793,923 + -0.7 793,923 + +0.3 793,924 - -1.2 793,975 + -0.2 793,975 + -0.6 793,975 + +0.8 794,021 + -0.1 794,178 - +0.5 794,178 - +0.5 794,180 - -0.2 794,180 - -0.1 794,279 - +0.5 794,323 + +0.9 794,358 - +1.3 794,363 + +0.2 794,400 - -0.1 794,478 - -0.1 794,486 + +0.1 794,567 + +0.4 794,573 + -0.3 794,619 + +0.4 794,619 + -0.3 794,619 + -0.2 794,620 - +0.9 794,620 - -0.3 794,651 + -0.4 794,677 - -1.2 794,707 + -0.9 794,708 - +0.3 794,717 - -0.3 794,717 - -0.7 794,717 - +0.8 794,822 - -0.7 794,822 - -0.2
Or see this region's nucleotide sequence