Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17105

Experiment: L-Isoleucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (N)
3,704,992	+		RR42_RS17100	0.22	+0.4
3,704,993	-		RR42_RS17100	0.22	+1.0
3,704,993	-		RR42_RS17100	0.22	+0.6
3,704,993	-		RR42_RS17100	0.22	-0.4
3,705,121	+		RR42_RS17100	0.35	-0.1
3,705,135	+		RR42_RS17100	0.36	-1.5
3,705,136	-		RR42_RS17100	0.36	+0.5
3,705,136	-		RR42_RS17100	0.36	+0.8
3,705,187	+		RR42_RS17100	0.42	-0.1
3,705,187	+		RR42_RS17100	0.42	+0.5
3,705,188	-		RR42_RS17100	0.42	-0.7
3,705,188	-		RR42_RS17100	0.42	+1.0
3,705,188	-		RR42_RS17100	0.42	-0.2
3,705,188	-		RR42_RS17100	0.42	-0.4
3,705,188	-		RR42_RS17100	0.42	+1.4
3,705,249	-		RR42_RS17100	0.48	+0.5
3,705,274	+		RR42_RS17100	0.50	-0.5
3,705,407	+		RR42_RS17100	0.63	+0.0
3,705,408	-		RR42_RS17100	0.63	-0.5
3,705,408	-		RR42_RS17100	0.63	-0.7
3,705,412	+		RR42_RS17100	0.64	-0.8
3,705,427	+		RR42_RS17100	0.65	-0.2
3,705,428	-		RR42_RS17100	0.65	+0.2
3,705,428	-		RR42_RS17100	0.65	-0.2
3,705,868	-				-0.1
3,705,883	-				-0.5
3,705,934	-				+0.3
3,705,934	-				-0.0
3,706,459	+		RR42_RS17105	0.23	-2.7
3,706,460	-		RR42_RS17105	0.23	-4.2
3,706,498	+		RR42_RS17105	0.25	-2.7
3,706,498	+		RR42_RS17105	0.25	-1.5
3,706,508	-		RR42_RS17105	0.25	-1.7
3,706,605	+		RR42_RS17105	0.29	-1.9
3,706,605	+		RR42_RS17105	0.29	-2.9
3,706,605	+		RR42_RS17105	0.29	+0.4
3,706,606	-		RR42_RS17105	0.29	-2.2
3,706,653	+		RR42_RS17105	0.31	-2.0
3,706,653	+		RR42_RS17105	0.31	+0.9
3,706,654	-		RR42_RS17105	0.31	-3.5
3,707,106	+		RR42_RS17105	0.51	-3.5
3,707,107	-		RR42_RS17105	0.51	-3.6
3,707,107	-		RR42_RS17105	0.51	-3.3
3,707,244	+		RR42_RS17105	0.57	-1.9
3,707,448	+		RR42_RS17105	0.66	-2.0
3,707,488	-		RR42_RS17105	0.68	-2.9
3,707,488	-		RR42_RS17105	0.68	-0.1
3,707,488	-		RR42_RS17105	0.68	-2.8
3,707,856	+		RR42_RS17105	0.84	-2.9
3,707,856	+		RR42_RS17105	0.84	-0.1
3,707,856	+		RR42_RS17105	0.84	-2.7
3,707,856	+		RR42_RS17105	0.84	-2.8
3,707,856	+		RR42_RS17105	0.84	-1.5
3,707,857	-		RR42_RS17105	0.84	-1.3
3,707,857	-		RR42_RS17105	0.84	-2.0
3,707,857	-		RR42_RS17105	0.84	-4.0
3,707,857	-		RR42_RS17105	0.84	-0.6
3,707,857	-		RR42_RS17105	0.84	-3.0
3,707,859	+		RR42_RS17105	0.84	-3.7
3,707,859	+		RR42_RS17105	0.84	-4.3
3,707,859	+		RR42_RS17105	0.84	-0.5
3,707,859	+		RR42_RS17105	0.84	-2.1
3,707,860	-		RR42_RS17105	0.84	-1.5
3,707,860	-		RR42_RS17105	0.84	-3.3
3,707,860	-		RR42_RS17105	0.84	-1.1
3,708,076	+				-2.5
3,708,077	-				-2.6
3,708,134	+				-3.1
3,708,152	+				-0.9
3,708,153	-				-3.5
3,708,154	+				-3.1
3,708,154	+				-4.2
3,708,155	-				-1.1
3,708,315	+		RR42_RS17110	0.28	-3.5
3,708,316	-		RR42_RS17110	0.28	-0.1
3,708,317	+		RR42_RS17110	0.29	-2.2
3,708,317	+		RR42_RS17110	0.29	-0.7
3,708,317	+		RR42_RS17110	0.29	-3.1
3,708,317	+		RR42_RS17110	0.29	+1.9
3,708,317	+		RR42_RS17110	0.29	-2.8
3,708,317	+		RR42_RS17110	0.29	-3.1
3,708,317	+		RR42_RS17110	0.29	-0.7
3,708,317	+		RR42_RS17110	0.29	-2.3
3,708,317	+		RR42_RS17110	0.29	-0.1
3,708,317	+		RR42_RS17110	0.29	-2.0
3,708,317	+		RR42_RS17110	0.29	-3.2
3,708,317	+		RR42_RS17110	0.29	-2.6
3,708,317	+		RR42_RS17110	0.29	-2.3
3,708,318	-		RR42_RS17110	0.29	-1.0
3,708,318	-		RR42_RS17110	0.29	+0.0
3,708,318	-		RR42_RS17110	0.29	-1.5
3,708,318	-		RR42_RS17110	0.29	+0.1
3,708,318	-		RR42_RS17110	0.29	-0.3
3,708,318	-		RR42_RS17110	0.29	+1.5
3,708,318	-		RR42_RS17110	0.29	+0.0
3,708,318	-		RR42_RS17110	0.29	-0.4
3,708,318	-		RR42_RS17110	0.29	-0.8
3,708,318	-		RR42_RS17110	0.29	+0.2
3,708,336	+		RR42_RS17110	0.35	-2.7
3,708,337	-		RR42_RS17110	0.35	-1.6
3,708,395	+		RR42_RS17110	0.53	-2.4
3,708,395	+		RR42_RS17110	0.53	-3.1
3,708,395	+		RR42_RS17110	0.53	-2.1
3,708,396	-		RR42_RS17110	0.53	+0.2
3,708,396	-		RR42_RS17110	0.53	+0.2
3,708,461	+		RR42_RS17110	0.73	-2.3
3,708,461	+		RR42_RS17110	0.73	-3.3
3,708,461	+		RR42_RS17110	0.73	-1.1
3,708,461	+		RR42_RS17110	0.73	-1.6
3,708,461	+		RR42_RS17110	0.73	-1.6
3,708,462	-		RR42_RS17110	0.73	-1.1
3,708,462	-		RR42_RS17110	0.73	+0.2
3,708,462	-		RR42_RS17110	0.73	-0.7
3,708,462	-		RR42_RS17110	0.73	-0.6
3,708,462	-		RR42_RS17110	0.73	+1.4
3,708,462	-		RR42_RS17110	0.73	+0.0
3,708,502	+		RR42_RS17110	0.85	-1.8
3,708,502	+		RR42_RS17110	0.85	-2.5
3,708,502	+		RR42_RS17110	0.85	-1.6
3,708,503	-		RR42_RS17110	0.86	+0.9
3,708,503	-		RR42_RS17110	0.86	+0.3
3,708,503	-		RR42_RS17110	0.86	-0.6
3,708,543	+				-2.7
3,708,543	+				-0.1
3,708,543	+				-1.4
3,708,544	-				+0.0
3,708,555	+				-2.1
3,708,555	+				-1.7
3,708,555	+				-2.2
3,708,568	-				-0.0
3,708,568	-				-0.2
3,708,724	+				+0.4
3,708,724	+				-0.2
3,708,731	+				+0.3
3,708,731	+				-0.3
3,708,731	+				-0.4
3,708,731	+				+0.3
3,708,732	-				+0.1
3,708,732	-				+0.3
3,708,732	-				+0.0
3,708,732	-				+0.6
3,708,732	-				+0.9
3,708,732	-				+0.7
3,708,732	-				+0.3
3,708,732	-				-0.3
3,708,834	+				-0.0
3,708,995	+				-1.1
3,708,996	-				+0.6
3,709,035	+				+0.6
3,709,035	+				+0.1
3,709,035	+				-0.3
3,709,036	-				+0.4
3,709,036	-				+0.7
3,709,063	-				-1.1